Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C08
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 180 3e-46
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 180 3e-46
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 180 3e-46
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 180 5e-46
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 179 8e-46
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 179 8e-46
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 71 4e-13
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 67 5e-12
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 66 7e-12
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 66 7e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 66 9e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 66 9e-12
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 66 9e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 66 9e-12
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 66 9e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 65 2e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 65 2e-11
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 65 2e-11
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 65 2e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 64 4e-11
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 1e-10
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 60 4e-10
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 2.2
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 2.2
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 3.8
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 3.8
U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 26 8.8
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 180 bits (439), Expect = 3e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDL+SEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 180 bits (439), Expect = 3e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDL+SEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 180 bits (438), Expect = 3e-46
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 180 bits (437), Expect = 5e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
EWIPNNVKTAVCDIPPRG+KMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 EWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 179 bits (435), Expect = 8e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 DWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 179 bits (435), Expect = 8e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
Sbjct: 343 DWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 402
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
MDEMEFTEAESNMNDLVSEYQQY
Sbjct: 403 MDEMEFTEAESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (284), Expect = 2e-27
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
E +P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT
Sbjct: 341 ESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT--- 397
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 398 MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (284), Expect = 2e-27
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 187
E +P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT
Sbjct: 341 ESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT--- 397
Query: 188 MDEMEFTEAESNMNDLVSEYQQY 256
M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 398 MEESEFTDAENKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 70.5 bits (165), Expect = 4e-13
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP L+ A + N+TAIQE + R+ +F M+ ++AF
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 66.9 bits (156), Expect = 5e-12
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP L+ A + N+TAI E + R+ +F M+ ++AF
Sbjct: 350 DWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 409
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 410 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 66.5 bits (155), Expect = 7e-12
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
EW P K + PP + + I N+TAI E + R+ +F M+ ++AF
Sbjct: 351 EWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAF 410
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 411 VHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 66.5 bits (155), Expect = 7e-12
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
EW P K + PP + + I N+TAI E + R+ +F M+ ++AF
Sbjct: 323 EWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAF 382
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 383 VHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 343 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAF 402
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 403 VHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 343 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAF 402
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 403 VHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 343 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAF 402
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 403 VHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 343 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAF 402
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 403 VHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 343 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAF 402
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 403 VHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 9e-12
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 343 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAF 402
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 403 VHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 344 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 403
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 404 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 64.9 bits (151), Expect = 2e-11
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 8 EWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 163
+W P K + PP + A + N+TAI E + R+ +F M+ ++AF
Sbjct: 345 DWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 404
Query: 164 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 VHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 64.1 bits (149), Expect = 4e-11
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 71 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 250
A + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 369 AVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 428
Query: 251 Q 253
+
Sbjct: 429 E 429
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.1 bits (144), Expect = 1e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +2
Query: 83 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 253
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 60.5 bits (140), Expect = 4e-10
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 71 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 250
A + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y
Sbjct: 377 AVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYA 436
Query: 251 Q 253
+
Sbjct: 437 E 437
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 41 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 196
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 197 MEFTEAESNMNDLVSEY 247
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 41 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 196
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 197 MEFTEAESNMNDLVSEY 247
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 41 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 196
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 197 MEFTEAESNMNDLVSEY 247
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 153 RLNIAVNCSEMRLNSSWMAVELPMKVAAIFSPR 55
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 65 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 235
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 236 VSEYQ 250
+ EY+
Sbjct: 428 LDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 65 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 235
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 236 VSEYQ 250
+ EY+
Sbjct: 428 LDEYK 432
>U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical
protein F08D12.6 protein.
Length = 498
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 5 EEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAI-QELFKRISEQFTAMFRRKAF 163
+ W V+ +C I +G+ I NS+++ E+ R F+A F F
Sbjct: 162 KNWTDEIVQNVICSIQHKGISFNKKLISNSSSLNHEILVRNFFSFSASFPEHNF 215
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 175 VPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSA 56
V Q++L S+ G F + E+++DGG D G L A
Sbjct: 494 VRTQQTLMSKWQGS-FDASCEEMMDGGDAEDRGHGRLNPA 532
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 68 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 247
MAA +G S+ I +L K + A F GEG+ E++ E D +S++
Sbjct: 2 MAARLLGTSSRIFKLNKHLHTSKVAFMPVVQFKLSDIGEGIAEVQVKEWYVKEGDTISQF 61
Query: 248 QQ 253
+
Sbjct: 62 DK 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,469,394
Number of Sequences: 27780
Number of extensions: 95272
Number of successful extensions: 361
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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