Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C05
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal pro... 132 1e-31
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 31 0.46
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 31 0.46
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 29 1.4
U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z68752-5|CAA92984.1| 199|Caenorhabditis elegans Hypothetical pr... 28 3.2
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 28 3.2
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 5.6
U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical pr... 27 7.4
>AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 27 protein.
Length = 83
Score = 132 bits (319), Expect = 1e-31
Identities = 57/75 (76%), Positives = 64/75 (85%)
Frame = +3
Query: 63 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 242
MPLA+DLLHP P E R HKLKRLV HPNSYFMDVKC GC+KI+TVFSHA VVVC GC+
Sbjct: 1 MPLAVDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCN 60
Query: 243 TILCQPTGGRARLTE 287
T+LCQPT G+A+LTE
Sbjct: 61 TVLCQPTRGKAKLTE 75
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 30.7 bits (66), Expect = 0.46
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 254
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 30.7 bits (66), Expect = 0.46
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 254
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 84 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVC 230
LH +P H +R VP + MD+KCP C+K+ +V+C
Sbjct: 81 LHATPGRLHGHHS-RRSVP---VFMMDMKCPVCHKVVPSDDADIHLVMC 125
>U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical
protein D1014.2 protein.
Length = 425
Score = 28.3 bits (60), Expect = 2.4
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Frame = -2
Query: 409 KRHSFILLETNIILKL----IRLSLQDLMLFSSK*TSFHFPRTIT-SVNLARPPVGWQRI 245
K+HSF LL+ +LK R L+LF + S N V W
Sbjct: 6 KKHSFFLLDPFFLLKSPTERARFQFLSLLLFPDFLIKIRLLFQMNASTNATTTFVPW--- 62
Query: 244 VEHPAHTTTLCAWLNTVVIL*QPGHLTSMK*EFGCGTNLFNLCFLLSDAGEGCNKSIASG 65
+H T + +LN+ V++ ++ FGCG N+ NL LLS A I +
Sbjct: 63 -DHK--TLQIVMFLNSKVLI--------LQIIFGCGGNILNLMVLLSRAMRSRTNLIFAA 111
Query: 64 MVTAFL 47
M A L
Sbjct: 112 MAFADL 117
>Z68752-5|CAA92984.1| 199|Caenorhabditis elegans Hypothetical
protein T12G3.5 protein.
Length = 199
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 312 DVHLEENSIKSWRESRINFKIMFVSNNMNE 401
D L++NS K W E R K + + +N N+
Sbjct: 136 DAKLKQNSPKRWHELRKRIKYLMMQHNYNK 165
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 174 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 272
P CY+ +VFS R C C I C R
Sbjct: 161 PECYRCRSVFSVFTRKHHCRACGQIFCDKCSSR 193
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 333 SIKSWRESRINFKIMFVSNNMNE 401
S KSW E +IN + SNN NE
Sbjct: 576 SRKSWEEVKINHNNILSSNNSNE 598
Score = 26.6 bits (56), Expect = 7.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 215 EGCCMRRMFHNPLPAHWWP 271
+GCC++ +H P P+ + P
Sbjct: 402 KGCCVKDQYHEPAPSGYHP 420
>U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical
protein C32B5.9 protein.
Length = 470
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 389 IGNKHNLKINTALSPGLNAVFF*MNILSFSKNYNFR 282
+G++ N+K+ + P L+ F +N S +YN R
Sbjct: 301 LGSEDNIKLFEEIKPLLHLTSFPLNYFSLFNSYNLR 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,691,519
Number of Sequences: 27780
Number of extensions: 224016
Number of successful extensions: 472
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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