Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C04
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.   110   2e-26
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.   110   2e-26
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.   110   2e-26
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.   110   2e-26
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        22   9.3  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  110 bits (265), Expect = 2e-26
 Identities = 50/125 (40%), Positives = 75/125 (60%)
 Frame = +2

Query: 89  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 268
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 269 LECAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 448
              ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 449 LNRLI 463
           LN L+
Sbjct: 121 LNHLV 125


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  110 bits (265), Expect = 2e-26
 Identities = 50/125 (40%), Positives = 75/125 (60%)
 Frame = +2

Query: 89  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 268
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 269 LECAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 448
              ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 449 LNRLI 463
           LN L+
Sbjct: 121 LNHLV 125


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  110 bits (265), Expect = 2e-26
 Identities = 50/125 (40%), Positives = 75/125 (60%)
 Frame = +2

Query: 89  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 268
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 269 LECAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 448
              ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 449 LNRLI 463
           LN L+
Sbjct: 121 LNHLV 125


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  110 bits (265), Expect = 2e-26
 Identities = 50/125 (40%), Positives = 75/125 (60%)
 Frame = +2

Query: 89  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 268
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 269 LECAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 448
              ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L +  P+Y +
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 449 LNRLI 463
           LN L+
Sbjct: 121 LNHLV 125


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
 Frame = +1

Query: 325 QLYPYNPHH--PGTLRLCF 375
           QL PYNP H  PG+  L +
Sbjct: 2   QLKPYNPEHKPPGSKDLVY 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,983
Number of Sequences: 2352
Number of extensions: 11912
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)