Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C03
(273 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 42 2e-05
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 33 0.010
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 31 0.022
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 31 0.029
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 30 0.068
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 29 0.089
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 29 0.089
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 0.21
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 2.5
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 25 2.5
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 24 4.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 23 5.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 41.9 bits (94), Expect = 2e-05
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NGYIT +EL L +GE ++ ++ ++ D D DG I+YEEF ++
Sbjct: 99 NGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRV 146
Score = 37.9 bits (84), Expect = 3e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
R +G IT +EL + +G+ T A+L ++ D D +G ID+ EF+ M
Sbjct: 23 RDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTM 73
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 32.7 bits (71), Expect = 0.010
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +1
Query: 13 NGYITRDELQAALEM-IGEPVTDAQLNQVLALG----DIDHDGRIDYEEF 147
+GYI+ EL L+M +G + + QL Q++ D D DG+I +EEF
Sbjct: 107 DGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEF 156
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 31.5 bits (68), Expect = 0.022
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
+NGY++ + L ++ +L ++ L DID DG D++EF
Sbjct: 19 ENGYLSGSKAAGVLR--SSKLSSDKLEKIWDLADIDDDGMFDFDEF 62
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 31.1 bits (67), Expect = 0.029
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+ G I+ L+ + + E + D +L ++ D+D DG I+ +EF+
Sbjct: 123 ETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFI 169
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.068
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NGYI E AL + + +L L D+D++G I Y+E +++
Sbjct: 77 NGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRI 124
Score = 24.6 bits (51), Expect = 2.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 13 NGYITRDELQAALEMI---GEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+G++ + E Q + G+P A+ V + D D +G ID++EF+
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEY--VFNVFDADKNGYIDFKEFI 86
Score = 23.4 bits (48), Expect = 5.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 12/58 (20%)
Frame = +1
Query: 10 DNGYITRDEL----QAALEMIG--------EPVTDAQLNQVLALGDIDHDGRIDYEEF 147
+NG I+ DE+ A +M+G E + ++N++ + D + DG++ EEF
Sbjct: 112 NNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 29.5 bits (63), Expect = 0.089
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
+ ++GYI + ++ +GE ++D ++ ++ D + G DY +FV+
Sbjct: 89 KDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 29.5 bits (63), Expect = 0.089
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 16 GYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
GYI ++L+ + +GE +T QL +L L +G++ EEF ++
Sbjct: 27 GYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGT--NGKVSREEFAEL 71
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 0.21
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGD 111
D GYI +DE A+E+I ++ L +LA D
Sbjct: 349 DRGYIDKDEFAVAMEIIKLRLSGKSLASILAYDD 382
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 147 KFFIIDSAIMVDIT*CQHLV*LCVCN 70
++F++ ++ D+T ++L LC+CN
Sbjct: 1012 QYFLVTPKLLPDLTYHRNLKVLCICN 1037
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 24.6 bits (51), Expect = 2.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 85 LNQVLALGDIDHDGRIDYEEF 147
L + D DH G++ +EEF
Sbjct: 335 LEETFQKADADHSGKLSFEEF 355
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 139 HNRFCHHGRYHLMPTP 92
H CHHG++ L P P
Sbjct: 366 HEEHCHHGKF-LRPVP 380
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.4 bits (48), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 7 GDNGYITRDELQAALEMIGEPVTDAQLNQVL 99
GD G + RDE AL +I + ++ VL
Sbjct: 869 GDKGSLDRDEFAVALHLIYRKLNGNEVPAVL 899
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 911,304
Number of Sequences: 5004
Number of extensions: 13158
Number of successful extensions: 49
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 59659786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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