Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_C03
(273 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 50 2e-07
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 50 2e-07
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 50 2e-07
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 50 2e-07
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 47 2e-06
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 45 6e-06
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 44 2e-05
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 44 2e-05
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 43 3e-05
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 43 3e-05
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 43 3e-05
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 40 2e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 40 2e-04
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 39 4e-04
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 38 7e-04
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 38 7e-04
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 38 0.001
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 38 0.001
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 38 0.001
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 37 0.002
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 36 0.003
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 35 0.007
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 34 0.012
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 34 0.012
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 33 0.028
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 33 0.028
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 33 0.028
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 33 0.037
AF357878-1|AAK27716.1| 589|Caenorhabditis elegans receptor-medi... 31 0.084
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 31 0.084
AF357876-1|AAK27714.1| 576|Caenorhabditis elegans receptor-medi... 31 0.084
AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor med... 31 0.084
AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor med... 31 0.084
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 31 0.084
AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor med... 31 0.084
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 31 0.084
AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor med... 31 0.084
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 31 0.11
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 31 0.11
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 31 0.15
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 30 0.26
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 30 0.26
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 29 0.59
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 28 0.79
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 28 0.79
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 28 0.79
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 28 0.79
AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical ... 26 3.2
U64835-1|AAO25997.1| 335|Caenorhabditis elegans Serpentine rece... 26 4.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 25 5.5
AC024880-5|AAF60913.1| 309|Caenorhabditis elegans Hypothetical ... 25 5.5
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical pr... 25 7.3
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 50.0 bits (114), Expect = 2e-07
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
R NG+IT DE + + +G+ +D ++++++A DID DG+IDYEEF
Sbjct: 118 RDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
Score = 36.3 bits (80), Expect = 0.003
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NG I+ EL A+ +G+ T+ +L ++ DID G ID+ EF +M
Sbjct: 49 NGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQM 96
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 50.0 bits (114), Expect = 2e-07
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
R NG+IT DE + + +G+ +D ++++++A DID DG+IDYEEF
Sbjct: 118 RDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
Score = 36.3 bits (80), Expect = 0.003
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NG I+ EL A+ +G+ T+ +L ++ DID G ID+ EF +M
Sbjct: 49 NGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQM 96
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 50.0 bits (114), Expect = 2e-07
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NG+I+ EL+ + +GE +TD ++++++ DID DG+++YEEFV M
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
+G IT EL + +G+ T+A+L ++ D D +G ID+ EF+ M
Sbjct: 25 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 50.0 bits (114), Expect = 2e-07
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NG+I+ EL+ + +GE +TD ++++++ DID DG+++YEEFV M
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
+G IT EL + +G+ T+A+L ++ D D +G ID+ EF+ M
Sbjct: 25 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 47.2 bits (107), Expect = 2e-06
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
+ +G I+ D+L + +GE +T+ + +++ GD+DHDG ID++EFV +
Sbjct: 91 KNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVNI 141
Score = 41.5 bits (93), Expect = 8e-05
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
+ +G ITR EL+ AL +GE +++++ ++ D+D +G ID +EF+ +
Sbjct: 18 KNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNV 68
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 45.2 bits (102), Expect = 6e-06
Identities = 18/46 (39%), Positives = 32/46 (69%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+GYI R+EL+A ++ +G+ T+ +L+ + D D DG ID++EF+
Sbjct: 35 DGYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFL 80
Score = 43.2 bits (97), Expect = 3e-05
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
+GYITR EL+ A + +G ++D + + D ++DG+I+++EF +M
Sbjct: 104 DGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQNNDGKINFQEFCEM 151
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NG IT E + + +G ++ ++++++ D+D DG IDYEEFVKM
Sbjct: 167 NGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKM 214
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NG IT E + + +G ++ ++++++ D+D DG IDYEEFVKM
Sbjct: 110 NGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKM 157
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGYI+R L+A L+ I + +TD QL + + D D G+I++EEF
Sbjct: 108 NGYISRPTLKALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEF 152
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGYI+R L+A L+ I + +TD QL + + D D G+I++EEF
Sbjct: 108 NGYISRPTLKALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEF 152
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGYI+R L+A L+ I + +TD QL + + D D G+I++EEF
Sbjct: 108 NGYISRPTLKALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEF 152
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 39.9 bits (89), Expect = 2e-04
Identities = 16/48 (33%), Positives = 32/48 (66%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NGYI +L+ L + + V++ +L++++A D D G +D++EF++M
Sbjct: 109 NGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEM 156
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 39.9 bits (89), Expect = 2e-04
Identities = 16/48 (33%), Positives = 32/48 (66%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NGYI +L+ L + + V++ +L++++A D D G +D++EF++M
Sbjct: 109 NGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEM 156
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 39.1 bits (87), Expect = 4e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
NGYIT E + + +GE ++ ++++++ D D D +ID +EFV M
Sbjct: 109 NGYITAQEFKHFMTTMGERFSEEEVDEIIREVDKDGDEQIDLDEFVNM 156
Score = 34.3 bits (75), Expect = 0.012
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
N + EL A+ M+G T+ +L ++ D+D +G+ID+ EF KM
Sbjct: 37 NNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKM 84
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 38.3 bits (85), Expect = 7e-04
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
++G IT DEL+ A++ G+ T +L ++ GD D +G I ++EF +
Sbjct: 141 NDGRITIDELEKAMQKCGQKPTKLELRLIMYHGDNDQNGVITFDEFAHL 189
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 38.3 bits (85), Expect = 7e-04
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQV----LALGDIDHDGRIDYEEFVK 153
N YITR+E + L M+G +T QL+++ L D D DG+I +E+F +
Sbjct: 145 NNYITREEFKVILNSMVGANITSDQLDKIADKTLEEADQDRDGKISFEDFCR 196
Score = 32.3 bits (70), Expect = 0.048
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHD---GRIDYEEFVKM 156
+ GY++RD+ E+ P+ D ++ LGD D D G++ + +FV++
Sbjct: 58 KNGQGYLSRDDFLNVPELAVNPLGDRIIDAFFTLGDSDGDSKSGQLTFRQFVRI 111
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQV----LALGDIDHDGRIDYEEFVK 153
N YITR+E + L M+G +T QL+++ + D D DG+I ++EF +
Sbjct: 127 NDYITREEFKVILNSMVGANITSDQLDKIADRTIEEADADRDGKISFDEFCR 178
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
R NG IT +E + + +G + ++ +++ D D +G IDYEEFVK+
Sbjct: 112 RDGNGVITANEFKLFMINMGMCFDEVEVEEMMNEVDCDGNGEIDYEEFVKI 162
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 37.5 bits (83), Expect = 0.001
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRI 132
NG+I+ EL+ + +GE +TD ++++++ DID DG+I
Sbjct: 47 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQI 86
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQL-NQVLALGDIDHDGRIDYEEFVKM 156
R +NG I++ + + L +G+ +TD Q+ +++ D+D +G IDY+EF M
Sbjct: 141 RSENGGISKKDFRFILRELGD-ITDNQIIDEIFNEADVDGNGVIDYDEFTYM 191
Score = 30.3 bits (65), Expect = 0.19
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
+G I DEL+AA++ +G T +L++++ D + +ID++EF
Sbjct: 70 SGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQRGNHQIDFDEF 114
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 36.3 bits (80), Expect = 0.003
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
N Y+ +D L L IGEP+T ++ Q L I +G ID+ +VK
Sbjct: 81 NNYVQKDTLLQLLTSIGEPLTPQEVKQFLNHVSIRANGDIDWVSYVK 127
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
+G I +EL+ A+ IG A+++ V+ D D +G ID+EEF
Sbjct: 65 SGAIGNEELKQAMISIGLHANKAEIDNVIKEVDADGNGEIDFEEF 109
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 34.3 bits (75), Expect = 0.012
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
+ YI +EL+ +E +GE T L +++ D D DG+I EF
Sbjct: 558 DSYIDFNELKRMMEKLGEAQTHIALKELIKKVDEDQDGKISQREF 602
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 34.3 bits (75), Expect = 0.012
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+G+I+ ELQA + + +T+ +++ + DI DG +D EEF+
Sbjct: 293 DGFISVAELQAVMTNLQAWLTEEEIDDGIRSADISGDGLVDLEEFI 338
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 33.1 bits (72), Expect = 0.028
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +1
Query: 13 NGYITRDELQAALEM-IGEPVTDAQLNQV----LALGDIDHDGRIDYEEF 147
+G+I+ EL L+M +G + D+QL Q+ + D D DG+I ++EF
Sbjct: 104 DGFISNGELFQVLKMMVGNNLKDSQLQQIVDKTILFHDKDGDGKISFQEF 153
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 33.1 bits (72), Expect = 0.028
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+G I+ E+ L +G V+ + V+ D+ DG+ID+EEF+
Sbjct: 64 SGTISSSEVAKMLNELGIDVSPKVVQAVMRSSDVSGDGQIDFEEFL 109
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 33.1 bits (72), Expect = 0.028
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +1
Query: 13 NGYITRDELQAALEM-IGEPVTDAQLNQV----LALGDIDHDGRIDYEEF 147
+G+I+ EL L+M +G + D+QL Q+ + D D DG+I ++EF
Sbjct: 104 DGFISNGELFQVLKMMVGNNLKDSQLQQIVDKTILFHDKDGDGKISFQEF 153
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 32.7 bits (71), Expect = 0.037
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
+G IT DE+ L + A ++ + D++ DG+I + EFVKM
Sbjct: 109 DGAITEDEMAEILRRTADLGDRAAISDMFKATDLNGDGKITFFEFVKM 156
Score = 31.5 bits (68), Expect = 0.084
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+G ++R+E+ A L I T +L+ + D D G+I EEFV
Sbjct: 36 DGRLSRNEIAALLRTINVEPTRVELDFIFGEMDTDKTGKISKEEFV 81
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 76 DAQLNQVLALGDIDHDGRIDYEEFVKM 156
D QL++ L D+D DGR+ E +
Sbjct: 21 DLQLSETFDLLDVDKDGRLSRNEIAAL 47
>AF357878-1|AAK27716.1| 589|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform I protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 502 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 544
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 748 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 790
>AF357876-1|AAK27714.1| 576|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform IV protein.
Length = 576
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 489 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 531
>AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform f protein.
Length = 555
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 468 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 510
>AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform d protein.
Length = 576
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 489 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 531
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 699 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 741
>AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform e protein.
Length = 613
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 526 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 568
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 748 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 790
>AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform c protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 13 NGYITRDELQAALE-MIGEPVTDAQLNQVLALGDIDHDGRIDYEEF 147
NGY++ +AA E M+ + ++ L +V L DID DG++D +EF
Sbjct: 502 NGYLSG---RAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 544
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
+G+I+ E Q A+E + T + ++ D+++DG++DY EF +
Sbjct: 4207 DGWISPKEFQRAMES-QKMYTVEDITYLMMCTDVNNDGKVDYMEFTE 4252
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
+G+I+ E Q A+E + T + ++ D+++DG++DY EF +
Sbjct: 4199 DGWISPKEFQRAMES-QKMYTVEDITYLMMCTDVNNDGKVDYMEFTE 4244
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.15
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
+ +G + DEL L + G + +L D D DG++ YEE VK
Sbjct: 226 KNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDDDKDGQLSYEEIVK 275
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 29.9 bits (64), Expect = 0.26
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEE 144
+G+I+ E AAL + D +L+ +L D+D DG I +E
Sbjct: 87 DGHISFSEFIAALSITSRGTLDEKLDWAFSLYDVDKDGFITKDE 130
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 29.9 bits (64), Expect = 0.26
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 85 LNQVLALGDIDHDGRIDYEEF 147
L+Q+ AL D+D DGR+D E+
Sbjct: 48 LSQIWALSDLDKDGRLDIREY 68
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +1
Query: 40 QAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
+ A+++ G P++D ++ V+ L D + DG++ +EE V
Sbjct: 483 RVAVKVTGIPLSDHVVDVVITLFDDNLDGKLSHEEMV 519
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 7 GDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
G+NG I + + ++ D L + D+D +G +D EEF K+
Sbjct: 279 GENGLINFSDYLFLMTLLSTSHADFAL--AFKIFDVDGNGALDKEEFTKV 326
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 28.3 bits (60), Expect = 0.79
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
++G+I E A+ + + +L + DID +G ID +E +K+
Sbjct: 78 NSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKI 126
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
+ G I EL+ L +GE ++ + +++L G D +G + YE+F+K
Sbjct: 96 ETGKILAAELRHILLALGERLSADEADELLK-GVEDGEGMVKYEDFIK 142
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 28.3 bits (60), Expect = 0.79
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVKM 156
++G+I E A+ + + +L + DID +G ID +E +K+
Sbjct: 78 NSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKI 126
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 10 DNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFVK 153
+ G I EL+ L +GE ++ + +++L G D +G + YE+F+K
Sbjct: 96 ETGKILAAELRHILLALGERLSADEADELLK-GVEDGEGMVKYEDFIK 142
>AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical
protein Y73C8B.5 protein.
Length = 97
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 13 NGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDHDGRIDYEEFV 150
NG+I+ EL+ ++ + + DID +G++D +E +
Sbjct: 42 NGFISVAELEPLFSNFQARLSAEGIRKTFRYTDIDRNGQVDLDELI 87
>U64835-1|AAO25997.1| 335|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 28 protein.
Length = 335
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 144 ICEDASVKCHLVEDLISFIIKVLKTSDYRAVS 239
+ ED+ HLV+ +I+ VL TS +R S
Sbjct: 60 VFEDSFFTLHLVDGVITLYFLVLNTSFFRVTS 91
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 4 RGDNGYITRDELQAALEMIGEPVTDAQLNQVLALGDIDH 120
R NG++ D L + L ++ + TDA+L + AL D+
Sbjct: 831 RNANGHLLSDLLSSYLCLLEDDNTDARLGALKALAIFDN 869
>AC024880-5|AAF60913.1| 309|Caenorhabditis elegans Hypothetical
protein Y97E10AR.3 protein.
Length = 309
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 34 ELQAALEM-IGEPVTDAQLNQVLALGDIDHD 123
E QA L + PV + QLN++L + D+D D
Sbjct: 77 ESQAKLHYALSIPVDEFQLNELLQIADVDLD 107
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 76 DAQLNQVLALGDIDHDGRIDYEEFV 150
DA+L++VLA D + GR+ +E F+
Sbjct: 794 DAELHRVLAHVDPNRMGRVPFEAFL 818
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 76 DAQLNQVLALGDIDHDGRIDYEEFV 150
DA+L++VLA D + GR+ +E F+
Sbjct: 820 DAELHRVLAHVDPNRMGRVPFEAFL 844
>Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical
protein F55A11.1 protein.
Length = 186
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 76 DAQLNQVLALGDIDHDGRIDYEEFVK 153
+ ++ +L D + DG IDY EF+K
Sbjct: 138 ETMIDSILKDDDFNADGFIDYGEFLK 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,205,294
Number of Sequences: 27780
Number of extensions: 78460
Number of successful extensions: 263
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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