Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C03
         (273 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   3.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   4.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   4.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   4.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   6.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    20   6.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   6.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 90   PGVGIR*YRP*WQNRL 137
            PG GI  +R  W +RL
Sbjct: 973  PGTGIAPFRGFWHHRL 988


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +3

Query: 141 RICEDASVKCHLVEDLISFIIKVLKTSDYRAVSCA 245
           RIC   ++   L+E+L +    + +T +Y+   C+
Sbjct: 328 RICIGETMPMELIENLRNHPEYIDETRNYQECKCS 362


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 118 GRYHLMPTPGLAV 80
           G++HL+PT  L V
Sbjct: 183 GKFHLLPTGELLV 195


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 118 GRYHLMPTPGLAV 80
           G++HL+PT  L V
Sbjct: 183 GKFHLLPTGELLV 195


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 124 HHGRYHLMPTPGLAVR 77
           H G +   PTPG  ++
Sbjct: 248 HQGNFRAGPTPGTILK 263


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 124 HHGRYHLMPTPGLAVR 77
           H G +   PTPG  ++
Sbjct: 163 HQGNFRAGPTPGTILK 178


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 124 HHGRYHLMPTPGLAVR 77
           H G +   PTPG  ++
Sbjct: 482 HQGNFRAGPTPGTILK 497


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,340
Number of Sequences: 438
Number of extensions: 999
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)