Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_C01
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.7  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    20   6.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   6.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.2  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 169 HHGVYKRTSPSGN*HFPLPNGWSPQAS*SH 80
           HH      + +    FPL  G SP AS  H
Sbjct: 24  HHHEQSAAAAAAYRSFPLSLGMSPYASSQH 53


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 103 TTHLGAENVNFQMETYVYKRRGDGT 177
           T  L   N N+   TY+ K  G G+
Sbjct: 272 TFTLSNSNTNYNPGTYINKEAGGGS 296


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 252 WILHGDNSTSSEYKLFPCT 196
           W+L G   T +  K F CT
Sbjct: 21  WLLQGHIRTHTGEKPFSCT 39


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 97  AATTHLGAENVNFQMETYVYKRRGDGTH 180
           AAT HLG+       E++ +      TH
Sbjct: 148 AATHHLGSVYSRHPYESWPFNTMSGATH 175


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 96  KHLSHIFLAERKQV 55
           KH+ +I L  RKQV
Sbjct: 275 KHIDNISLRARKQV 288


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 175 YRHHGVYKRTSPSGN*HFPLPNGWSPQ 95
           Y  HG ++RT    +  FPL +  S Q
Sbjct: 708 YDFHGQWERTVGHNSPLFPLESATSYQ 734


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,202
Number of Sequences: 336
Number of extensions: 1482
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)