Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B21
(421 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002777-1|AAH02777.1| 245|Homo sapiens exosome component 4 pro... 154 1e-37
AK000598-1|BAA91279.1| 245|Homo sapiens protein ( Homo sapiens ... 154 1e-37
AF281133-1|AAF82134.1| 245|Homo sapiens exosome component Rrp41... 154 1e-37
BC052252-1|AAH52252.1| 272|Homo sapiens exosome component 6 pro... 59 7e-09
BC107696-1|AAI07697.1| 235|Homo sapiens exosome component 5 pro... 42 0.001
BC007742-1|AAH07742.1| 235|Homo sapiens exosome component 5 pro... 42 0.001
AF285785-1|AAM75154.1| 268|Homo sapiens chronic myelogenous leu... 42 0.001
AF281134-1|AAF82135.1| 235|Homo sapiens exosome component Rrp46... 42 0.001
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 34 0.22
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 34 0.22
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 34 0.22
BC053660-1|AAH53660.1| 783|Homo sapiens polyribonucleotide nucl... 32 0.68
AY027528-1|AAK13047.1| 783|Homo sapiens 3'-5' RNA exonuclease p... 32 0.68
AK027437-1|BAB55109.1| 504|Homo sapiens protein ( Homo sapiens ... 32 0.68
AJ458465-1|CAD30289.1| 783|Homo sapiens polynucleotide phosphor... 32 0.68
AC015982-3|AAY24271.1| 783|Homo sapiens unknown protein. 32 0.68
AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B prot... 31 1.2
AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal ... 31 1.2
AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal ... 31 1.2
AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein. 31 1.2
AF399523-1|AAK95008.1| 216|Homo sapiens olfactory receptor prot... 31 1.6
AB065779-1|BAC05999.1| 314|Homo sapiens seven transmembrane hel... 31 1.6
BC115386-1|AAI15387.1| 495|Homo sapiens HSF5 protein protein. 29 8.4
BC115385-1|AAI15386.1| 475|Homo sapiens HSF5 protein protein. 29 8.4
BC033020-1|AAH33020.1| 596|Homo sapiens heat shock transcriptio... 29 8.4
BC033017-1|AAH33017.1| 596|Homo sapiens heat shock transcriptio... 29 8.4
>BC002777-1|AAH02777.1| 245|Homo sapiens exosome component 4
protein.
Length = 245
Score = 154 bits (373), Expect = 1e-37
Identities = 74/119 (62%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Frame = +2
Query: 71 MPGPDLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQ--A 244
M G +LLS QG R+DGRR ELR+I+ ++GVF Q DGSAY+EQGNTK A VYGPH+
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 245 SKSKMSTDGVVVNCQYSMATFSTGERKNRPRGDRKSQEMSMHLRQALTAAIKTELYPRS 421
S+++ D +VNCQYS ATFSTGERK RP GDRKS EM + LRQ AAI T+L+PRS
Sbjct: 61 SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRS 119
>AK000598-1|BAA91279.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ20591 fis, clone KAT09018. ).
Length = 245
Score = 154 bits (373), Expect = 1e-37
Identities = 74/119 (62%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Frame = +2
Query: 71 MPGPDLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQ--A 244
M G +LLS QG R+DGRR ELR+I+ ++GVF Q DGSAY+EQGNTK A VYGPH+
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 245 SKSKMSTDGVVVNCQYSMATFSTGERKNRPRGDRKSQEMSMHLRQALTAAIKTELYPRS 421
S+++ D +VNCQYS ATFSTGERK RP GDRKS EM + LRQ AAI T+L+PRS
Sbjct: 61 SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRS 119
>AF281133-1|AAF82134.1| 245|Homo sapiens exosome component Rrp41
protein.
Length = 245
Score = 154 bits (373), Expect = 1e-37
Identities = 74/119 (62%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Frame = +2
Query: 71 MPGPDLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQ--A 244
M G +LLS QG R+DGRR ELR+I+ ++GVF Q DGSAY+EQGNTK A VYGPH+
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 245 SKSKMSTDGVVVNCQYSMATFSTGERKNRPRGDRKSQEMSMHLRQALTAAIKTELYPRS 421
S+++ D +VNCQYS ATFSTGERK RP GDRKS EM + LRQ AAI T+L+PRS
Sbjct: 61 SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRS 119
>BC052252-1|AAH52252.1| 272|Homo sapiens exosome component 6
protein.
Length = 272
Score = 58.8 bits (136), Expect = 7e-09
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Frame = +2
Query: 80 PDLLSSQGLRLDGRR-PNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSK 256
P L ++ G R P LR + + G+ +Q GSAYLE G TKV AV GP QA +
Sbjct: 17 PQLYAADEEEAPGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGE 76
Query: 257 -----MSTDGVV-------VNCQYSMATFSTGERKNRPRGDRKSQEMSMHLRQALTAAIK 400
G + C + A F+ G R+ P G + +E+++ L++AL A++
Sbjct: 77 RGGGPAGAGGEAPAALRGRLLCDFRRAPFA-GRRRRAPPGGCEERELALALQEALEPAVR 135
Query: 401 TELYPRS 421
YPR+
Sbjct: 136 LGRYPRA 142
>BC107696-1|AAI07697.1| 235|Homo sapiens exosome component 5
protein.
Length = 235
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 134 LRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSK 256
LR C+ + ++PDGSA QG+T V A VYGP + SK
Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 68
>BC007742-1|AAH07742.1| 235|Homo sapiens exosome component 5
protein.
Length = 235
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 134 LRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSK 256
LR C+ + ++PDGSA QG+T V A VYGP + SK
Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 68
>AF285785-1|AAM75154.1| 268|Homo sapiens chronic myelogenous
leukemia tumor antigen 28 protein.
Length = 268
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 134 LRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSK 256
LR C+ + ++PDGSA QG+T V A VYGP + SK
Sbjct: 61 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 101
>AF281134-1|AAF82135.1| 235|Homo sapiens exosome component Rrp46
protein.
Length = 235
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 134 LRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSK 256
LR C+ + ++PDGSA QG+T V A VYGP + SK
Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSK 68
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 33.9 bits (74), Expect = 0.22
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 98 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSKMSTDGVV 277
+ R DGR E R +G + DGSA ++ GNT V V A + G V
Sbjct: 20 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYV 79
Query: 278 V 280
V
Sbjct: 80 V 80
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 33.9 bits (74), Expect = 0.22
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 98 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSKMSTDGVV 277
+ R DGR E R +G + DGSA ++ GNT V V A + G V
Sbjct: 20 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYV 79
Query: 278 V 280
V
Sbjct: 80 V 80
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 33.9 bits (74), Expect = 0.22
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 98 QGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV*AAVYGPHQASKSKMSTDGVV 277
+ R DGR E R +G + DGSA ++ GNT V V A + G V
Sbjct: 18 ENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYV 77
Query: 278 V 280
V
Sbjct: 78 V 78
>BC053660-1|AAH53660.1| 783|Homo sapiens polyribonucleotide
nucleotidyltransferase 1 protein.
Length = 783
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 107 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV 214
R DGR LR + C++ +F GSA ++G T+V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQV 393
>AY027528-1|AAK13047.1| 783|Homo sapiens 3'-5' RNA exonuclease
protein.
Length = 783
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 107 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV 214
R DGR LR + C++ +F GSA ++G T+V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQV 393
>AK027437-1|BAB55109.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14531 fis, clone NT2RM2000371, weakly similar to
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (EC 2.7.7.8).
).
Length = 504
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 107 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV 214
R DGR LR + C++ +F GSA ++G T+V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQV 393
>AJ458465-1|CAD30289.1| 783|Homo sapiens polynucleotide
phosphorylase-like protein protein.
Length = 783
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 107 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV 214
R DGR LR + C++ +F GSA ++G T+V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQV 393
>AC015982-3|AAY24271.1| 783|Homo sapiens unknown protein.
Length = 783
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 107 RLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKV 214
R DGR LR + C++ +F GSA ++G T+V
Sbjct: 358 RCDGRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQV 393
>AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B protein.
Length = 1960
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -2
Query: 237 CGPYTAAQTLVFPCSKYALPSGCVK----TPSLHLIRRNSLGLRPSKRNP*LDSKSGPG 73
C P+ A V PC + P G K PS + + P+K +P LDSK GPG
Sbjct: 1039 CSPHPA----VAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSKMGPG 1093
>AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 2582
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -2
Query: 237 CGPYTAAQTLVFPCSKYALPSGCVK----TPSLHLIRRNSLGLRPSKRNP*LDSKSGPG 73
C P+ A V PC + P G K PS + + P+K +P LDSK GPG
Sbjct: 1663 CSPHPA----VAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSKMGPG 1717
>AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 2582
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -2
Query: 237 CGPYTAAQTLVFPCSKYALPSGCVK----TPSLHLIRRNSLGLRPSKRNP*LDSKSGPG 73
C P+ A V PC + P G K PS + + P+K +P LDSK GPG
Sbjct: 1663 CSPHPA----VAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSKMGPG 1717
>AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein.
Length = 2584
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -2
Query: 237 CGPYTAAQTLVFPCSKYALPSGCVK----TPSLHLIRRNSLGLRPSKRNP*LDSKSGPG 73
C P+ A V PC + P G K PS + + P+K +P LDSK GPG
Sbjct: 1663 CSPHPA----VAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSKMGPG 1717
>AF399523-1|AAK95008.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 56 NYLWNMPGPDLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYL 193
+YLW M GP +L LRL+ PN + C+ GS L
Sbjct: 81 SYLWGMFGPLVLLCYALRLNFSGPNVINHFFCEYTALISVSGSDIL 126
>AB065779-1|BAC05999.1| 314|Homo sapiens seven transmembrane helix
receptor protein.
Length = 314
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 56 NYLWNMPGPDLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYL 193
+YLW M GP +L LRL+ PN + C+ GS L
Sbjct: 150 SYLWGMFGPLVLLCYALRLNFSGPNVINHFFCEYTALISVSGSDIL 195
>BC115386-1|AAI15387.1| 495|Homo sapiens HSF5 protein protein.
Length = 495
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 231 PYTAAQTLVFPCSKYALPSGCVKTPSLHLIRRNSLGLRPSK 109
PY+ T S Y L G +TP H I +NSLG+ P +
Sbjct: 101 PYSCVSTPSHDHSTYPL-KGLDRTPVPHRIWQNSLGMHPGQ 140
>BC115385-1|AAI15386.1| 475|Homo sapiens HSF5 protein protein.
Length = 475
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 231 PYTAAQTLVFPCSKYALPSGCVKTPSLHLIRRNSLGLRPSK 109
PY+ T S Y L G +TP H I +NSLG+ P +
Sbjct: 81 PYSCVSTPSHDHSTYPL-KGLDRTPVPHRIWQNSLGMHPGQ 120
>BC033020-1|AAH33020.1| 596|Homo sapiens heat shock transcription
factor family member 5 protein.
Length = 596
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 231 PYTAAQTLVFPCSKYALPSGCVKTPSLHLIRRNSLGLRPSK 109
PY+ T S Y L G +TP H I +NSLG+ P +
Sbjct: 202 PYSCVSTPSHDHSTYPL-KGLDRTPVPHRIWQNSLGMHPGQ 241
>BC033017-1|AAH33017.1| 596|Homo sapiens heat shock transcription
factor family member 5 protein.
Length = 596
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 231 PYTAAQTLVFPCSKYALPSGCVKTPSLHLIRRNSLGLRPSK 109
PY+ T S Y L G +TP H I +NSLG+ P +
Sbjct: 202 PYSCVSTPSHDHSTYPL-KGLDRTPVPHRIWQNSLGMHPGQ 241
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,795,388
Number of Sequences: 237096
Number of extensions: 1334482
Number of successful extensions: 2306
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2303
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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