Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B20
(222 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60656-1|CAA43063.1| 225|Homo sapiens elongation factor 1-beta ... 52 4e-07
X60489-1|CAA43019.1| 225|Homo sapiens elongation factor-1-beta ... 52 4e-07
CR456825-1|CAG33106.1| 225|Homo sapiens EEF1B2 protein. 52 4e-07
BT007079-1|AAP35742.1| 225|Homo sapiens eukaryotic translation ... 52 4e-07
BC067787-1|AAH67787.1| 225|Homo sapiens eukaryotic translation ... 52 4e-07
BC004931-1|AAH04931.1| 225|Homo sapiens eukaryotic translation ... 52 4e-07
BC000211-1|AAH00211.1| 225|Homo sapiens eukaryotic translation ... 52 4e-07
AC007383-2|AAY15062.1| 225|Homo sapiens unknown protein. 52 4e-07
BC132809-1|AAI32810.1| 190|Homo sapiens chromosome 9 open readi... 29 3.5
AL807752-26|CAI12773.2| 190|Homo sapiens chromosome 9 open read... 29 3.5
AK124899-1|BAC85986.1| 190|Homo sapiens protein ( Homo sapiens ... 29 3.5
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 28 4.7
BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation ... 28 6.2
BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation ... 28 6.2
AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation ... 28 6.2
AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation ... 28 6.2
AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation ... 28 6.2
AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of aminoa... 28 6.2
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 27 8.2
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 27 8.2
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 27 8.2
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 27 8.2
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 27 8.2
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 27 8.2
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 27 8.2
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 27 8.2
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 27 8.2
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 27 8.2
>X60656-1|CAA43063.1| 225|Homo sapiens elongation factor 1-beta
protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>X60489-1|CAA43019.1| 225|Homo sapiens elongation factor-1-beta
protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>CR456825-1|CAG33106.1| 225|Homo sapiens EEF1B2 protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>BT007079-1|AAP35742.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>BC067787-1|AAH67787.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>BC004931-1|AAH04931.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>BC000211-1|AAH00211.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>AC007383-2|AAY15062.1| 225|Homo sapiens unknown protein.
Length = 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 110 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
M GD+K+ GL LN YLA++SY+ GY PSQAD+ V
Sbjct: 1 MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAV 37
>BC132809-1|AAI32810.1| 190|Homo sapiens chromosome 9 open reading
frame 139 protein.
Length = 190
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 142 PLSGFNVSQCHFSIRNLIYSSKPHGPATPRAEFLQPGGST 23
P+S F +CH + R+L++S P PGGS+
Sbjct: 23 PISLFTQPRCHSAARDLVWSQAWPDPDVLEISMQTPGGSS 62
>AL807752-26|CAI12773.2| 190|Homo sapiens chromosome 9 open reading
frame 139 protein.
Length = 190
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 142 PLSGFNVSQCHFSIRNLIYSSKPHGPATPRAEFLQPGGST 23
P+S F +CH + R+L++S P PGGS+
Sbjct: 23 PISLFTQPRCHSAARDLVWSQAWPDPDVLEISMQTPGGSS 62
>AK124899-1|BAC85986.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ42909 fis, clone BRHIP3020182. ).
Length = 190
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 142 PLSGFNVSQCHFSIRNLIYSSKPHGPATPRAEFLQPGGST 23
P+S F +CH + R+L++S P PGGS+
Sbjct: 23 PISLFTQPRCHSAARDLVWSQAWPDPDVLEISMQTPGGSS 62
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1237 MQPITRPPQPSYQTPPSLSNHISRAPSP 1264
>BT007306-1|AAP35970.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LNELNQYLAERSYVSGYTPSQADI 214
L +LN YL ++ Y++GY + ADI
Sbjct: 95 LKDLNSYLEDKVYLTGYNFTLADI 118
>BC005291-1|AAH05291.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LNELNQYLAERSYVSGYTPSQADI 214
L +LN YL ++ Y++GY + ADI
Sbjct: 95 LKDLNSYLEDKVYLTGYNFTLADI 118
>AL451187-1|CAI14747.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LNELNQYLAERSYVSGYTPSQADI 214
L +LN YL ++ Y++GY + ADI
Sbjct: 95 LKDLNSYLEDKVYLTGYNFTLADI 118
>AL355499-1|CAH72539.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LNELNQYLAERSYVSGYTPSQADI 214
L +LN YL ++ Y++GY + ADI
Sbjct: 95 LKDLNSYLEDKVYLTGYNFTLADI 118
>AL023694-1|CAI21644.1| 174|Homo sapiens eukaryotic translation
elongation factor 1 epsilon 1 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LNELNQYLAERSYVSGYTPSQADI 214
L +LN YL ++ Y++GY + ADI
Sbjct: 95 LKDLNSYLEDKVYLTGYNFTLADI 118
>AB011079-1|BAA24926.1| 174|Homo sapiens p18 component of
aminoacyl-tRNA synthetase complex protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LNELNQYLAERSYVSGYTPSQADI 214
L +LN YL ++ Y++GY + ADI
Sbjct: 95 LKDLNSYLEDKVYLTGYNFTLADI 118
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1016 MQPITRPPQPSYQTPPSLPNHISRAPSP 1043
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 765 MQPITRPPQPSYQTPPSLPNHISRAPSP 792
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1016 MQPITRPPQPSYQTPPSLPNHISRAPSP 1043
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1016 MQPITRPPQPSYQTPPSLPNHISRAPSP 1043
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1016 MQPITRPPQPSYQTPPSLPNHISRAPSP 1043
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 765 MQPITRPPQPSYQTPPSLPNHISRAPSP 792
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1445 MQPITRPPQPSYQTPPSLPNHISRAPSP 1472
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 1020 MQPITRPPQPSYQTPPSLPNHISRAPSP 1047
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 766 MQPITRPPQPSYQTPPSLPNHISRAPSP 793
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 86 LKQTTRPGNPSCRIPAARGIHYSRAPPP 3
++ TRP PS + P + H SRAP P
Sbjct: 765 MQPITRPPQPSYQTPPSLPNHISRAPSP 792
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,648,054
Number of Sequences: 237096
Number of extensions: 633245
Number of successful extensions: 1485
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 76,859,062
effective HSP length: 52
effective length of database: 64,530,070
effective search space used: 1355131470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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