Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B20
(222 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 26 3.1
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 26 3.1
Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical pr... 25 5.5
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 25 5.5
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 25 5.5
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 25 5.5
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 25 5.5
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 25 5.5
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 25 7.3
Z68879-8|CAE17858.1| 93|Caenorhabditis elegans Hypothetical pr... 25 9.6
AF025465-3|AAB71027.2| 380|Caenorhabditis elegans Hypothetical ... 25 9.6
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 116 LGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
+ DVK+ GL N LAE+++ +G+ S D ++
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQL 36
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 157 VQFI*P-LSGFNVSQCHFSIRNLIYSSKPHGPATPRAEFLQPGGSTI 20
+Q + P +S SQ R Y P GP+T L PGG+++
Sbjct: 1083 LQLVIPSISSSQSSQSAEPARETCYVMYPSGPSTSVGSQLSPGGASV 1129
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 157 VQFI*P-LSGFNVSQCHFSIRNLIYSSKPHGPATPRAEFLQPGGSTI 20
+Q + P +S SQ R Y P GP+T L PGG+++
Sbjct: 1083 LQLVIPSISSSQSSQSAEPARETCYVMYPSGPSTSVGSQLSPGGASV 1129
>Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical
protein C36A4.6 protein.
Length = 501
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 140 GLNELNQYLAERSYVSGYTPSQADI 214
G+N+LNQ L + +Y +G+ +++ I
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAI 141
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 85 SSKPHGPATPRAEFLQPGGS 26
SSKP PA PRA L G S
Sbjct: 319 SSKPKDPAAPRASTLPLGSS 338
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 85 SSKPHGPATPRAEFLQPGGS 26
SSKP PA PRA L G S
Sbjct: 319 SSKPKDPAAPRASTLPLGSS 338
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 85 SSKPHGPATPRAEFLQPGGS 26
SSKP PA PRA L G S
Sbjct: 459 SSKPKDPAAPRASTLPLGSS 478
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 85 SSKPHGPATPRAEFLQPGGS 26
SSKP PA PRA L G S
Sbjct: 319 SSKPKDPAAPRASTLPLGSS 338
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 85 SSKPHGPATPRAEFLQPGGS 26
SSKP PA PRA L G S
Sbjct: 319 SSKPKDPAAPRASTLPLGSS 338
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +2
Query: 140 GLNELNQYLAERSYVSGYTPSQADI 214
G+N+LNQ L + +Y +G+ +++ +
Sbjct: 93 GMNQLNQSLLQNTYATGWKHTRSAV 117
>Z68879-8|CAE17858.1| 93|Caenorhabditis elegans Hypothetical
protein K08F4.12 protein.
Length = 93
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 95 ISNRKMALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKV 220
+ N+K++ + + + N + + L + SGY S AD K+
Sbjct: 17 VENQKISSSNSECLKKSNSITKKLVQVRNYSGYAESHADEKI 58
>AF025465-3|AAB71027.2| 380|Caenorhabditis elegans Hypothetical
protein K02E7.6 protein.
Length = 380
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 119 GDVKTAQGLNELNQYLAERSYVSGYTPSQAD 211
GDV + Q L+ L+Q L GY+P +D
Sbjct: 73 GDVLSDQSLDFLDQALKNAVIPQGYSPQGSD 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,258,611
Number of Sequences: 27780
Number of extensions: 90659
Number of successful extensions: 208
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 12,740,198
effective HSP length: 53
effective length of database: 11,267,858
effective search space used: 225357160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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