Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B19
(325 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 100 5e-22
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 100 5e-22
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 100 5e-22
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 100 5e-22
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 73 6e-14
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 30 0.60
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 30 0.60
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 30 0.60
L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein. 28 3.2
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 28 3.2
BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro... 27 7.3
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA... 27 7.3
AY069323-1|AAL39468.1| 782|Drosophila melanogaster LD04107p pro... 26 9.7
AE014296-3066|AAF49225.1| 265|Drosophila melanogaster CG6865-PA... 26 9.7
AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-P... 26 9.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 100 bits (239), Expect = 5e-22
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +1
Query: 19 RPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGAG 192
RPD+VN+VH + +N RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG G
Sbjct: 36 RPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 93
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2
Query: 185 GQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQXXXXXXXXXXXSGVP 325
GQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Q SGVP
Sbjct: 91 GQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVP 137
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 100 bits (239), Expect = 5e-22
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +1
Query: 19 RPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGAG 192
RPD+VN+VH + +N RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG G
Sbjct: 36 RPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 93
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2
Query: 185 GQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQXXXXXXXXXXXSGVP 325
GQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Q SGVP
Sbjct: 91 GQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVP 137
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 100 bits (239), Expect = 5e-22
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +1
Query: 19 RPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGAG 192
RPD+VN+VH + +N RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG G
Sbjct: 36 RPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 93
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2
Query: 185 GQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQXXXXXXXXXXXSGVP 325
GQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Q SGVP
Sbjct: 91 GQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVP 137
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 100 bits (239), Expect = 5e-22
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +1
Query: 19 RPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGAG 192
RPD+VN+VH + +N RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG G
Sbjct: 36 RPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 93
Score = 72.1 bits (169), Expect = 1e-13
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +2
Query: 185 GQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQXXXXXXXXXXXSGVP 325
GQGAFGNMCRGGRMFAPTK +RRWHR+VN+ Q SGVP
Sbjct: 91 GQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVP 137
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 73.3 bits (172), Expect = 6e-14
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +2
Query: 185 GQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQXXXXXXXXXXXSGVP 325
GQGAFGNMCRGGRMFAPTK +RRWHRRVN+ Q SGVP
Sbjct: 29 GQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQRRYALVSAIAASGVP 75
Score = 68.9 bits (161), Expect = 1e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +1
Query: 100 HQTSAESWGTGRAVARIPRVRGGGTHRSGAG 192
HQTSAESWGTGRAVARIPRVRGGGTHRSG G
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQG 31
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 30.3 bits (65), Expect = 0.60
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 191 PAPDLWVPPPRTRGIRATARPVPQDSAL 108
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 30.3 bits (65), Expect = 0.60
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 191 PAPDLWVPPPRTRGIRATARPVPQDSAL 108
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 30.3 bits (65), Expect = 0.60
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 191 PAPDLWVPPPRTRGIRATARPVPQDSAL 108
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
Length = 2412
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 228 SRRPSRGGAGTVA*TYGRDVLTWPTPWQRPG 320
S PSRG G + DV T P P Q+PG
Sbjct: 1409 SAAPSRGAPGLHTPSQFNDVSTSPIPLQKPG 1439
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 228 SRRPSRGGAGTVA*TYGRDVLTWPTPWQRPG 320
S PSRG G + DV T P P Q+PG
Sbjct: 1349 SAAPSRGAPGLHTPSQFNDVSTSPIPLQKPG 1379
>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p
protein.
Length = 2313
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 257 ASASTAWSARTYVRRGTCYRMHPAPDLWVPPPRTRGIRATARPVPQDSALV 105
ASA++A SA T R + + M L PPP + A+P P S +V
Sbjct: 121 ASAASASSAATVSRLFSMFEMSHQ-SLPPPPPPPTALEIFAKPRPTQSLIV 170
>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
protein.
Length = 2362
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 257 ASASTAWSARTYVRRGTCYRMHPAPDLWVPPPRTRGIRATARPVPQDSALV 105
ASA++A SA T R + + M L PPP + A+P P S +V
Sbjct: 121 ASAASASSAATVSRLFSMFEMSHQ-SLPPPPPPPTALEIFAKPRPTQSLIV 170
>AY069323-1|AAL39468.1| 782|Drosophila melanogaster LD04107p
protein.
Length = 782
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 221 VRRGTCYRMHPAPDLWVPPPRTRG 150
V +G C + HPA ++ PP T G
Sbjct: 756 VLKGVCAKKHPAVEVVKQPPATTG 779
>AE014296-3066|AAF49225.1| 265|Drosophila melanogaster CG6865-PA
protein.
Length = 265
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 70 QPYCVSKEAGHQTSAESWGT 129
QP CV E GH++ + +GT
Sbjct: 131 QPSCVGSEEGHRSLEQEYGT 150
>AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-PA
protein.
Length = 733
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -3
Query: 224 YVRRGTCYRMHPAPDL-WVPP--PRTRGIRATARPVPQ 120
+V + C HPAP + W PP IR +P+PQ
Sbjct: 81 HVEQSKCSHCHPAPAIKWQPPLILDDSHIRERIQPLPQ 118
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,220,133
Number of Sequences: 53049
Number of extensions: 314675
Number of successful extensions: 1350
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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