Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_B18
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   0.98 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   3.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   3.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   6.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   6.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    21   9.1  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 203 CRGSCTCILQCRR 241
           CR SC C  QCRR
Sbjct: 235 CRRSCYCGCQCRR 247


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = +3

Query: 27   GAPQRLAHHQFRSPNVHK-RRALPGATQRGVRRLDLADQVRSEA*QRHLRVSGVNWVRHA 203
            G P+   H  F  P   + R+ L G          + D VR E  Q+HL     +W R  
Sbjct: 946  GVPETAEHAMFECPRFAEVRQQLLGE--------GITDPVRPENLQQHLLRDAESWSRIC 997

Query: 204  VAAR 215
             AA+
Sbjct: 998  EAAK 1001


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 231 CNMQVHEPRQRA*PS*HLTLVSAVVTLLNVLDL 133
           C++   +P++RA  S HL + S  + L++  DL
Sbjct: 243 CSLYQVDPQRRAPHSHHLVIKSGELDLIDPHDL 275


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 82   DERFQVLHSEGSDDWILQ 135
            DER   L +E  +D+ILQ
Sbjct: 3317 DERINALEAEIKEDFILQ 3334


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 169 YECQVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINL 297
           Y+  +ST  GTL  +V   I   +A I    +H +   S I L
Sbjct: 617 YDVAISTCCGTLDHIVVETIDTAKACIEFLKQHDIGRASFIAL 659


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 26   GCAAETGTSSVPES*CTQTTSASRC 100
            G     G+ SVP S   Q ++AS C
Sbjct: 1218 GAGEGGGSRSVPPSTFAQNSNASNC 1242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,854
Number of Sequences: 2352
Number of extensions: 7961
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)