Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B18
(331 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 33 7e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 31 0.005
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 30 0.006
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 0.96
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 1.7
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 2.9
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 6.7
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 20 8.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 8.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 8.9
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 20 8.9
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 20 8.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 33.5 bits (73), Expect = 7e-04
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 127 ILQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCI 306
+L I + R G Y C +GT S L + VP +IL + GS + C
Sbjct: 642 MLMISVITARHAGEYVCTAENAAGTASHSTTLTVNVPPRWILEPTDKAFAQGSDARVECK 701
Query: 307 IEKSPVP 327
+ P P
Sbjct: 702 ADGFPKP 708
Score = 30.7 bits (66), Expect = 0.005
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +1
Query: 112 GSDDWILQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIA---VPEAFILGADEHHVDVG 282
G ++ +L+I+ V+K D G Y+C V + L + P E + G
Sbjct: 349 GLEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPG 408
Query: 283 STINLVCIIEKSPVP 327
++ L C+ +P P
Sbjct: 409 PSMFLKCVASGNPTP 423
Score = 29.5 bits (63), Expect = 0.011
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 118 DDWILQIKYVQKRDNGTYECQVSTGSGT-LSRLVHLHIAVPEAF 246
+D L I +QK + G Y C+ G G LS ++ + + P F
Sbjct: 736 EDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHF 779
Score = 29.1 bits (62), Expect = 0.015
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +1
Query: 76 TNDERFQV---LHSEGSDDWILQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHI-AVPEA 243
+N ER QV + G L I D G Y+C ++ G+ L++ +P
Sbjct: 435 SNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGLP-- 492
Query: 244 FILGADEHHVDVGSTINLVCIIEKSPV 324
FI D+ + G T+ + C + P+
Sbjct: 493 FIRHMDKKAIVAGETLRVTCPVAGYPI 519
Score = 25.8 bits (54), Expect = 0.14
Identities = 15/65 (23%), Positives = 25/65 (38%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCII 309
L I+ + D+G Y C V+ G S L + P + +D G C +
Sbjct: 272 LIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCNV 331
Query: 310 EKSPV 324
+P+
Sbjct: 332 RGNPI 336
Score = 22.2 bits (45), Expect = 1.7
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 61 GVLMYTNDERFQVLHSEGSDDWILQIKYVQKRDNGTYECQVST--GSGTLSRLVHLH 225
G ++ ++D Q+ EGS L IK V + D G Y C V G T++ + +H
Sbjct: 1314 GAVLQSSDRLRQL--PEGS----LFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVH 1364
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 30.7 bits (66), Expect = 0.005
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +1
Query: 127 ILQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCI 306
IL I+++ NG Y C + +S L + VP +I+ + V+ + L C
Sbjct: 669 ILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQ 728
Query: 307 IEKSPVP 327
+ P P
Sbjct: 729 AQGVPTP 735
Score = 30.3 bits (65), Expect = 0.006
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +1
Query: 100 LHSEGSDDWILQIKYVQKRDNGTYECQVSTGSG-TLSRLVHLHIA-VPEAFILGADEHHV 273
L G +L++ + + D G Y+C V G T L + P + E +
Sbjct: 374 LPGTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTL 433
Query: 274 DVGSTINLVCIIEKSPVP 327
G ++L C +P P
Sbjct: 434 QPGPAVSLKCSAAGNPTP 451
Score = 29.1 bits (62), Expect = 0.015
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +1
Query: 127 ILQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCI 306
+L ++ V DNG Y C S G S + L + P + V +G C
Sbjct: 294 VLALEAVTLEDNGIYRCSASNPGGEASAEIRLIVTAPLHVEVTPPLLSVHLGGNAEFRCE 353
Query: 307 IEKSP 321
+ P
Sbjct: 354 VSTHP 358
Score = 27.5 bits (58), Expect = 0.044
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVP 237
LQI + D+G Y CQ S G +LV L + P
Sbjct: 868 LQISSAEASDSGAYFCQASNLYGRDQQLVQLLVQEP 903
Score = 26.2 bits (55), Expect = 0.10
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVP 237
L + +Q +D G Y CQV G L + VP
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVP 1400
Score = 25.8 bits (54), Expect = 0.14
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHI-AVPEAFILGADEHHVDVGSTINLVCI 306
+ I +V D G Y C +G ++ L++ +P +I + G T+ L C
Sbjct: 484 VNISHVMVEDGGEYSCMAENRAGKVTHAARLNVYGLP--YIRLIPKVTAVAGETLRLKCP 541
Query: 307 IEKSPV 324
+ P+
Sbjct: 542 VAGYPI 547
Score = 21.8 bits (44), Expect = 2.2
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = +1
Query: 178 QVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCIIEKSPVP 327
QV S R+ +P + + HV + +LVC+ + P P
Sbjct: 218 QVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVAQACPTP 267
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 5 EAREGYHGCAAETGTSS 55
E REG++ C A G S
Sbjct: 774 EDREGFYLCQASNGIGS 790
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 30.3 bits (65), Expect = 0.006
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +1
Query: 100 LHSEGSDDWILQIKYVQKRDNGTYECQVSTGSG-TLSRLVHLHIA-VPEAFILGADEHHV 273
L G +L++ + + D G Y+C V G T L + P + E +
Sbjct: 374 LPGTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTL 433
Query: 274 DVGSTINLVCIIEKSPVP 327
G ++L C +P P
Sbjct: 434 QPGPAVSLKCSAAGNPTP 451
Score = 29.1 bits (62), Expect = 0.015
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +1
Query: 127 ILQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCI 306
+L ++ V DNG Y C S G S + L + P + V +G C
Sbjct: 294 VLALEAVTLEDNGIYRCSASNPGGEASAEIRLIVTAPLHVEVTPPLLSVHLGGNAEFRCE 353
Query: 307 IEKSP 321
+ P
Sbjct: 354 VSTHP 358
Score = 27.5 bits (58), Expect = 0.044
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVP 237
LQI + D+G Y CQ S G +LV L + P
Sbjct: 872 LQISSAEASDSGAYFCQASNLYGRDQQLVQLLVQEP 907
Score = 26.2 bits (55), Expect = 0.10
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHIAVP 237
L + +Q +D G Y CQV G L + VP
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVP 1404
Score = 25.8 bits (54), Expect = 0.14
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSGTLSRLVHLHI-AVPEAFILGADEHHVDVGSTINLVCI 306
+ I +V D G Y C +G ++ L++ +P +I + G T+ L C
Sbjct: 484 VNISHVMVEDGGEYSCMAENRAGKVTHAARLNVYGLP--YIRLIPKVTAVAGETLRLKCP 541
Query: 307 IEKSPV 324
+ P+
Sbjct: 542 VAGYPI 547
Score = 21.8 bits (44), Expect = 2.2
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = +1
Query: 178 QVSTGSGTLSRLVHLHIAVPEAFILGADEHHVDVGSTINLVCIIEKSPVP 327
QV S R+ +P + + HV + +LVC+ + P P
Sbjct: 218 QVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVAQACPTP 267
Score = 20.6 bits (41), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 5 EAREGYHGCAAETGTSS 55
E REG++ C A G S
Sbjct: 778 EDREGFYLCQASNGIGS 794
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 0.96
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 130 LQIKYVQKRDNGTYECQVSTGSG 198
L IK V D G Y CQ S+ G
Sbjct: 459 LIIKNVDYADTGAYMCQASSIGG 481
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 1.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 198 HAVAARAPAYCSAGGLYTGRRRTPCGRRVHHQPRLH 305
HA +A A AGGL RRR G LH
Sbjct: 520 HASSAPLLAATLAGGLCPHRRRANSGSTSSGDDELH 555
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 2.9
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +1
Query: 115 SDDWILQIKYVQKRDNGTYE 174
+DDW + Y K+D ++
Sbjct: 2 ADDWGKTVSYTNKKDESYFD 21
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 20.2 bits (40), Expect = 6.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 145 VQKRDNGTYECQVSTGS 195
VQKR+ EC +S S
Sbjct: 364 VQKRNGSMIECNISPRS 380
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 19.8 bits (39), Expect = 8.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 218 TCILQCRRPLYWAPTN 265
TCI+ R P PTN
Sbjct: 54 TCIVIWRNPSMQTPTN 69
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.8 bits (39), Expect = 8.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 209 GSCTCILQCRRPLYW 253
G TC+L C +Y+
Sbjct: 101 GYATCVLSCWTNIYY 115
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.8 bits (39), Expect = 8.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 209 GSCTCILQCRRPLYW 253
G TC+L C +Y+
Sbjct: 154 GYATCVLSCWTNIYY 168
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +2
Query: 203 CRGSCTCILQCRRPLYW 253
CRG C+ LQ W
Sbjct: 53 CRGRCSSYLQVSGSKIW 69
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 266 CSSAPSIKASGTAIC 222
CS PSI+ T+ C
Sbjct: 22 CSGYPSIRQGTTSYC 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,950
Number of Sequences: 438
Number of extensions: 1897
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7342137
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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