Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_B17
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.30 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   6.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.6  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 0.30
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 19  IKKILYTADSTMVNFRVFARAMSTIVKS 102
           I+K++Y  D   VNFR+    ++ ++K+
Sbjct: 383 IQKVIYGFDFNDVNFRILIANVNDLIKN 410


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 43  DSTMVNFRVFARAMSTIVK 99
           DS+ +N+R+F   +   VK
Sbjct: 513 DSSKINYRIFKANVKEAVK 531


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 223 HLSRCQLITLRLLQP 179
           +L RC L TLR+  P
Sbjct: 399 YLERCLLETLRMYPP 413


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 221 VKDIPSVSWEAASDQFYTLAMTDP 292
           +++ P+ SW +ASD     A+  P
Sbjct: 466 MEEEPAASWGSASDVTLDEAVKSP 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,217
Number of Sequences: 438
Number of extensions: 1933
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)