Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_B14
         (165 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   2.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    19   4.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    19   4.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   4.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   4.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    18   9.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    18   9.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    18   9.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              18   9.7  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  MYWCWVWTSWVTRMVL 119
           ++W W    W+ R VL
Sbjct: 174 IHWIWTPHGWMRRNVL 189


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 126 PTTRPYGLPRTSKP 85
           P TRP  L R +KP
Sbjct: 24  PPTRPTRLRREAKP 37


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 126 PTTRPYGLPRTSKP 85
           P TRP  L R +KP
Sbjct: 25  PPTRPARLRREAKP 38


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 132 FKPTTRPYGLP 100
           FK +++PYG P
Sbjct: 589 FKYSSQPYGFP 599


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 132 FKPTTRPYGLP 100
           FK +++PYG P
Sbjct: 589 FKYSSQPYGFP 599


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 4   RGSERVNRSSAKSLHRAGTQTAVCI 78
           RGS  V+ +S  S     TQT V I
Sbjct: 399 RGSMTVSVTSKPSTMERQTQTEVWI 423


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 97  PG*PVWSC 120
           PG  +WSC
Sbjct: 371 PGSSIWSC 378


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 97  PG*PVWSC 120
           PG  +WSC
Sbjct: 424 PGSSIWSC 431


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 58  TQTAVCIGAGFGRPG*PVW 114
           T+T  C   G   PG  VW
Sbjct: 874 TRTINCEIGGLQHPGAVVW 892


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,784
Number of Sequences: 438
Number of extensions: 669
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 34
effective length of database: 131,451
effective search space used:  2629020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)