Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_B13
         (447 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   4.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   8.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 319 RSRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRVVL 438
           ++RS  K   + ++RT   L P     LLAG H+  ++VL
Sbjct: 3   QNRSTDKLQMEILKRTVCRLKPSAHRCLLAGSHSFTQLVL 42


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +1

Query: 346 SKHVRRT---RPNLTPGTVCILLA 408
           S+ ++RT    P LTP T+C L+A
Sbjct: 453 SRVIQRTPSSSPPLTPNTICGLIA 476


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,769
Number of Sequences: 2352
Number of extensions: 9880
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)