Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B12
(335 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein. 36 0.041
AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone oxidore... 36 0.041
BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein. 33 0.17
AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone oxidore... 33 0.17
U02569-1|AAA93114.1| 466|Homo sapiens alpha1C adrenergic recept... 28 6.2
BC063864-1|AAH63864.1| 717|Homo sapiens F-box protein 42 protein. 28 6.2
BC043410-1|AAH43410.1| 716|Homo sapiens F-box protein 42 protein. 28 6.2
AL358794-1|CAH73774.1| 717|Homo sapiens F-box protein 42 protein. 28 6.2
AL109627-1|CAI22560.1| 717|Homo sapiens F-box protein 42 protein. 28 6.2
AB037753-1|BAA92570.1| 651|Homo sapiens KIAA1332 protein protein. 28 6.2
BC056893-1|AAH56893.1| 1564|Homo sapiens KIAA0372 protein. 28 8.2
AK057830-1|BAB71591.1| 165|Homo sapiens protein ( Homo sapiens ... 28 8.2
AB002370-1|BAA20827.2| 1568|Homo sapiens KIAA0372 protein. 28 8.2
>CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein.
Length = 105
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 165 RNAGHGVWT---YRAPPPMPSKKVIVMAEVLGGLCWWWILCHIATEPEHIFGEWRSVDPS 335
R+AG GV YR P + +V +E GL W+WIL + E + G + DPS
Sbjct: 32 RHAGGGVHIEPRYRQFPQLTRSQVF-QSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 90
>AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 105
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 165 RNAGHGVWT---YRAPPPMPSKKVIVMAEVLGGLCWWWILCHIATEPEHIFGEWRSVDPS 335
R+AG GV YR P + +V +E GL W+WIL + E + G + DPS
Sbjct: 32 RHAGGGVHIEPRYRQFPQLTRSQVF-QSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 90
>BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein.
Length = 95
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 168 NAGHGVWT---YRAPPPMPSKKVIVMAEVLGGLCWWWILCHIATEPEHIFGEWRSVDPS 335
+AG GV YR P + +V +E GL W+WIL + E + G + DPS
Sbjct: 23 SAGGGVHIEPRYRQFPQLTRSQVF-QSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 80
>AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 95
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 168 NAGHGVWT---YRAPPPMPSKKVIVMAEVLGGLCWWWILCHIATEPEHIFGEWRSVDPS 335
+AG GV YR P + +V +E GL W+WIL + E + G + DPS
Sbjct: 23 SAGGGVHIEPRYRQFPQLTRSQVF-QSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 80
>U02569-1|AAA93114.1| 466|Homo sapiens alpha1C adrenergic receptor
protein.
Length = 466
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 201 PPPMPSKKVIVMAEVLGGLCWWWILCHI 284
P P+ K I++ +LGGL + +LC+I
Sbjct: 18 PAPVNISKAILLGVILGGLILFGVLCNI 45
>BC063864-1|AAH63864.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -1
Query: 308 KDMFWFCGNVTKYPP-PTKTSKNFSH--HNYFFGGHWWGCTVC---PYPMASISFCLFN 150
KD+ G T+ P P + F H Y +WW C V P PMA S C+ +
Sbjct: 183 KDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVID 241
>BC043410-1|AAH43410.1| 716|Homo sapiens F-box protein 42 protein.
Length = 716
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -1
Query: 308 KDMFWFCGNVTKYPP-PTKTSKNFSH--HNYFFGGHWWGCTVC---PYPMASISFCLFN 150
KD+ G T+ P P + F H Y +WW C V P PMA S C+ +
Sbjct: 183 KDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVID 241
>AL358794-1|CAH73774.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -1
Query: 308 KDMFWFCGNVTKYPP-PTKTSKNFSH--HNYFFGGHWWGCTVC---PYPMASISFCLFN 150
KD+ G T+ P P + F H Y +WW C V P PMA S C+ +
Sbjct: 183 KDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVID 241
>AL109627-1|CAI22560.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -1
Query: 308 KDMFWFCGNVTKYPP-PTKTSKNFSH--HNYFFGGHWWGCTVC---PYPMASISFCLFN 150
KD+ G T+ P P + F H Y +WW C V P PMA S C+ +
Sbjct: 183 KDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVID 241
>AB037753-1|BAA92570.1| 651|Homo sapiens KIAA1332 protein protein.
Length = 651
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = -1
Query: 308 KDMFWFCGNVTKYPP-PTKTSKNFSH--HNYFFGGHWWGCTVC---PYPMASISFCLFN 150
KD+ G T+ P P + F H Y +WW C V P PMA S C+ +
Sbjct: 117 KDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVID 175
>BC056893-1|AAH56893.1| 1564|Homo sapiens KIAA0372 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 291 LWQCDKVSTTNKDLQELQPSQLLFWRALVGVH 196
L Q D+ + K EL+P QLL W+ L ++
Sbjct: 53 LEQPDQAQSAYKKAAELEPDQLLAWQGLANLY 84
>AK057830-1|BAB71591.1| 165|Homo sapiens protein ( Homo sapiens
cDNA FLJ25101 fis, clone CBR01328. ).
Length = 165
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 186 WTYRAPPPMPSKKVIVMAEVLGGLCW 263
W YR PPP P+ + + + LCW
Sbjct: 55 WYYRCPPPQPANFCVFTRDGV-SLCW 79
>AB002370-1|BAA20827.2| 1568|Homo sapiens KIAA0372 protein.
Length = 1568
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 291 LWQCDKVSTTNKDLQELQPSQLLFWRALVGVH 196
L Q D+ + K EL+P QLL W+ L ++
Sbjct: 57 LEQPDQAQSAYKKAAELEPDQLLAWQGLANLY 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,386,330
Number of Sequences: 237096
Number of extensions: 1209652
Number of successful extensions: 2351
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2350
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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