BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B12
(335 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015190-1|AAT94419.1| 94|Drosophila melanogaster RH18150p pro... 50 7e-07
AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA... 27 4.6
BT011329-1|AAR96121.1| 1659|Drosophila melanogaster SD20887p pro... 27 8.0
AY754058-1|AAV30852.1| 1620|Drosophila melanogaster DAXX protein. 27 8.0
AY058598-1|AAL13827.1| 950|Drosophila melanogaster LD29187p pro... 27 8.0
AE014134-1101|AAF52390.3| 1659|Drosophila melanogaster CG9537-PA... 27 8.0
AB062671-1|BAB78519.1| 1645|Drosophila melanogaster Daxx-like pr... 27 8.0
>BT015190-1|AAT94419.1| 94|Drosophila melanogaster RH18150p
protein.
Length = 94
Score = 50.0 bits (114), Expect = 7e-07
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 183 VWTYRAPPPMPSKKVIVMAEVLGGLCWWWILCHIATEPEHIFGEW 317
V +YR PP SK + A +GG WWW++ H+ EP+HI GE+
Sbjct: 30 VVSYRNGPPPHSKATKIGALTVGGAMWWWVIWHLWHEPDHITGEF 74
>AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA
protein.
Length = 4496
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 150 YYRQRFLSFVTVKLEKPVILLTFY 79
YY++R +F T E+P IL TF+
Sbjct: 411 YYKERLATFFTEPEERPPILWTFH 434
>BT011329-1|AAR96121.1| 1659|Drosophila melanogaster SD20887p protein.
Length = 1659
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 147 NIKQTERNAGHGVWTYRAPPPMPSKKVIVMAEVL 248
++ N HG +R P PMPS K ++ +++
Sbjct: 1620 SVSSLNANFVHGQDLHRKPNPMPSAKPVIADQII 1653
>AY754058-1|AAV30852.1| 1620|Drosophila melanogaster DAXX protein.
Length = 1620
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 147 NIKQTERNAGHGVWTYRAPPPMPSKKVIVMAEVL 248
++ N HG +R P PMPS K ++ +++
Sbjct: 1581 SVSSLNANFVHGQDLHRKPNPMPSAKPVIADQII 1614
>AY058598-1|AAL13827.1| 950|Drosophila melanogaster LD29187p protein.
Length = 950
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 147 NIKQTERNAGHGVWTYRAPPPMPSKKVIVMAEVL 248
++ N HG +R P PMPS K ++ +++
Sbjct: 911 SVSSLNANFVHGQDLHRKPNPMPSAKPVIADQII 944
>AE014134-1101|AAF52390.3| 1659|Drosophila melanogaster CG9537-PA
protein.
Length = 1659
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 147 NIKQTERNAGHGVWTYRAPPPMPSKKVIVMAEVL 248
++ N HG +R P PMPS K ++ +++
Sbjct: 1620 SVSSLNANFVHGQDLHRKPNPMPSAKPVIADQII 1653
>AB062671-1|BAB78519.1| 1645|Drosophila melanogaster Daxx-like protein
protein.
Length = 1645
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 147 NIKQTERNAGHGVWTYRAPPPMPSKKVIVMAEVL 248
++ N HG +R P PMPS K ++ +++
Sbjct: 1606 SVSSLNANFVHGQDLHRKPNPMPSAKPVIADQII 1639
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,501,607
Number of Sequences: 53049
Number of extensions: 348454
Number of successful extensions: 1278
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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