Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B09
(420 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0029 - 16610182-16611753 33 0.071
03_05_0751 - 27389910-27392105 30 0.66
05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581 29 1.1
01_07_0041 + 40688242-40688278,40688396-40688502,40688612-406887... 29 1.1
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 29 1.5
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 29 2.0
06_02_0064 + 11062798-11063568,11064212-11064261,11064354-110645... 29 2.0
02_02_0737 - 13529180-13529543,13530661-13531178 29 2.0
01_06_0695 - 31292622-31293317 29 2.0
04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572... 28 2.7
08_02_0373 + 16397003-16397015,16397742-16398091,16423530-164238... 28 3.5
06_03_1248 + 28685911-28687719 28 3.5
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 28 3.5
10_08_0931 - 21647562-21649037 27 4.6
07_03_0626 + 20060013-20060273,20061017-20061274 27 4.6
04_03_0123 + 11514565-11514735,11515967-11516500 27 4.6
02_03_0247 - 16809742-16809780,16810070-16810298,16810381-168105... 27 4.6
11_01_0731 - 6060680-6060982 27 6.1
10_08_0113 - 14896341-14897153 27 6.1
08_02_1485 - 27466761-27467753 27 6.1
03_03_0263 + 15984244-15985321,15985411-15986144 27 6.1
01_06_0240 + 27794741-27795466 27 6.1
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 27 8.1
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544... 27 8.1
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816... 27 8.1
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706... 27 8.1
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 27 8.1
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153... 27 8.1
02_01_0304 + 2037718-2037939,2038169-2038384,2038862-2039329,203... 27 8.1
>03_04_0029 - 16610182-16611753
Length = 523
Score = 33.5 bits (73), Expect = 0.071
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -3
Query: 283 GARAKEPTAPISEIRMGFDVAPHRSGARLVKSLCLEPPDSRGSTVSISLP 134
GA A P AP S G+D +PH R KS+ L+ SR +T+ ++P
Sbjct: 299 GATATSPVAPFSASPPGYDFSPHL--LRYAKSINLDLRISRAATLDDAVP 346
>03_05_0751 - 27389910-27392105
Length = 731
Score = 30.3 bits (65), Expect = 0.66
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 57 AAGGAKLPSAG--LCLNASKAEASLAESGKDMLTVEPRESGGSKQSDFTSRAP 209
A G AK AG + LN SKAE + + ++ E SKQS F S P
Sbjct: 246 AGGVAKRQEAGKAISLNVSKAEVLKVKKNRQSEDLDVMEGRNSKQSAFCSDEP 298
>05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581
Length = 311
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 30 GHLVHALGR-AAGGAKLPSAGLCLNASKAEASLA 128
G LV L R GG SAG+C S+ +ASLA
Sbjct: 203 GRLVETLARDGGGGGGAYSAGVCFYGSRMDASLA 236
>01_07_0041 +
40688242-40688278,40688396-40688502,40688612-40688707,
40688859-40688915,40689033-40689194,40689310-40689394,
40689648-40689738,40689813-40689977,40690121-40690240,
40690330-40690402,40690482-40690650,40690741-40691651,
40691839-40691931,40692065-40692255,40692343-40692455,
40692757-40692783,40693915-40693949
Length = 843
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -1
Query: 378 PSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSRLTGVERD 199
PST PR +R S EP V+P + V N P SP S + T V+ D
Sbjct: 337 PSTIPRPDRVSPWKI-EPASSPPVNPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTD 395
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 405 NRSQQDAALPSTTPRQERKSSTDYSEPRHRT 313
+R Q+D + P R + K S D S PR RT
Sbjct: 203 SRQQRDPSPPRRLSRHDSKESQDISPPRRRT 233
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -1
Query: 387 AALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHAL-KNRPRRSPRSEWASTSRLT 214
A+ PST P Q+R + + + ++ T+ DR A + A+ + P + R +S R+T
Sbjct: 395 ASAPSTPPAQDRHAQSYDVQLQYDTDFGEDRTEADSKAIYEPPPMKKSRKAHSSPQRIT 453
>06_02_0064 +
11062798-11063568,11064212-11064261,11064354-11064510,
11064598-11064816,11065301-11065429,11066502-11068031,
11068654-11069013,11069086-11069205,11069727-11069897,
11070022-11070180,11070327-11070452,11070660-11070968
Length = 1366
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -3
Query: 223 APHRSGARLVKSLCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSFXXXXXXXXX 44
AP+ +GARL++ L P S VS+ +P A+A+ PA S
Sbjct: 111 APNPAGARLMQLLGNTAPTHLESAVSMPMPSEFSAAAAVAPPAPLPAMPSAPPARMPSSS 170
Query: 43 *TKCPKLRFL 14
+K P+ R L
Sbjct: 171 SSKMPRGRLL 180
>02_02_0737 - 13529180-13529543,13530661-13531178
Length = 293
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 103 PLRPKPA*PNPARICSLWSPESREALNKVTLLVALHSGEARRR 231
P RP A P+P S SP + +++ + ++H G+A RR
Sbjct: 114 PSRPPSALPSPTASSSTSSPPVDKIISRRIQVASMHHGQAIRR 156
>01_06_0695 - 31292622-31293317
Length = 231
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 396 QQDAALPSTTPRQERKSSTDYSEPRHRTEVSP 301
QQD PS++ SST S P HR + P
Sbjct: 13 QQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPP 44
>04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,
5724297-5724558,5724662-5724960,5725040-5725453,
5725533-5725899,5726002-5726146,5726562-5727558
Length = 1015
Score = 28.3 bits (60), Expect = 2.7
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 399 SQQDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWAS 229
SQ A P T QE+ ST +PR V PDR ++ + RR+ R AS
Sbjct: 958 SQLGGAPPVHT--QEQSPSTPLPDPRATRAVPPDRFTYSQDHVRAQARRTKRGRGAS 1012
>08_02_0373 +
16397003-16397015,16397742-16398091,16423530-16423829,
16423908-16424354,16424441-16425046,16425140-16425327,
16425406-16425576,16425659-16425702,16425763-16425947,
16426033-16426071,16426282-16426332
Length = 797
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -1
Query: 396 QQDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHAL-KNRPRRSPRSEWASTSR 220
++ A+ PS P Q+R + + + ++ T+ DR+ A + A+ + P + R +S R
Sbjct: 473 KRPASTPSAPPAQDRHAQSYDVQLQYDTDFGEDRMEADSKAIHEPPPMKKSRKAHSSPQR 532
Query: 219 LT 214
+T
Sbjct: 533 IT 534
>06_03_1248 + 28685911-28687719
Length = 602
Score = 27.9 bits (59), Expect = 3.5
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -1
Query: 411 SLNRSQQDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWA 232
SL S + TTPR+ + S R D+ AVA + P+ ++ A
Sbjct: 71 SLLSSSPSSKGTGTTPRRSADKAPSASAASSRPITPKDKAPAVATSRPITPKDKAKAAAA 130
Query: 231 STSRLTGV 208
STSR + V
Sbjct: 131 STSRWSAV 138
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 136 ARICSLWSPESREALNKVTLLVALHSGEARRRS 234
AR C W PESR +++V ++A + +R+ +
Sbjct: 449 ARECLQWEPESRPTMSEVVQILATIAPSSRKHA 481
>10_08_0931 - 21647562-21649037
Length = 491
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 112 PKPA*PNPARICSLWSPESREALNKVTLLVALHSGEARRRSPF 240
P P P+P R+ SP S +L+K TL A +RRRSP+
Sbjct: 232 PSPPSPSPKRL----SPAS--SLSKETLAKASEDYSSRRRSPY 268
>07_03_0626 + 20060013-20060273,20061017-20061274
Length = 172
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 129 RLGWLRP*RRSGIIP 85
RLGWLRP R S ++P
Sbjct: 32 RLGWLRPSRLSAVVP 46
>04_03_0123 + 11514565-11514735,11515967-11516500
Length = 234
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 220 PHRSGARLVKSLCLEPPDSRGSTVSISLPDSARLASALE 104
P R AR ++ +PP + GST + S+P R S E
Sbjct: 183 PRRVFARAAAAITPDPPPAGGSTAADSIPRQFRRLSPAE 221
>02_03_0247 -
16809742-16809780,16810070-16810298,16810381-16810551,
16810630-16811516,16811604-16812050,16812129-16812836
Length = 826
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -1
Query: 396 QQDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHAL-KNRPRRSPRSEWASTSR 220
++ A+ PS P Q+R + + + ++ + DR+ A + A+ K P + R +S R
Sbjct: 488 KRPASAPSAPPAQDRHAQSYDVQLQYDADFGEDRMEADSKAIHKPPPMKKSRKAHSSPQR 547
Query: 219 LT 214
+T
Sbjct: 548 IT 549
>11_01_0731 - 6060680-6060982
Length = 100
Score = 27.1 bits (57), Expect = 6.1
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +3
Query: 30 GHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLT---VEPRESGGSKQSDFTS 200
G HALG GG + +AG C E ++ G + + GGS+ +
Sbjct: 8 GSATHALGSDNGGRRAAAAGACDGDVAGEEAMGHGGGGLALWRWADGSSGGGSRPARIRQ 67
Query: 201 -RAPLR 215
RA LR
Sbjct: 68 RRASLR 73
>10_08_0113 - 14896341-14897153
Length = 270
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = +1
Query: 310 LSSMSGLGIVCRRL----PFLAGCCAR 378
L++++GLGI RR P LAGCC R
Sbjct: 181 LAAIAGLGIPWRRSWPSPPSLAGCCCR 207
>08_02_1485 - 27466761-27467753
Length = 330
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 175 PPDSRGSTVSISLPDSARLASALEAFRHNPA 83
PP + G +S +P A LA++L + NPA
Sbjct: 39 PPSATGPVLSRDVPLDASLATSLRLYLPNPA 69
>03_03_0263 + 15984244-15985321,15985411-15986144
Length = 603
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 293 IRSGLTSVRCRGSE*SVDDFRSWRGVVLGRAASCCDLLRLSP 418
+ LTS+ RG + D ++W V+ SC D+ P
Sbjct: 142 VSRALTSIAWRGVDAVSQDLQAWLSAVITFQGSCVDMFPQGP 183
>01_06_0240 + 27794741-27795466
Length = 241
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 366 PRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTS 223
P QE ++ EP +PD GA H + + +P S A+TS
Sbjct: 49 PSQEEANNNQEQEPNAAAAATPDEAGANPHRIPD--DETPPSATATTS 94
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 93 IIPRMVASHHRPLGRVHEPNVRNCGSSRT 7
++P A+H LGR H+ N + GS+ T
Sbjct: 535 LVPPTNAAHQPSLGRDHDSNKKTSGSAGT 563
>04_03_1018 +
21753634-21753640,21754282-21754315,21754413-21754432,
21754485-21755782
Length = 452
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 45 ALGRAAGGAKLPSAGLCLNASKAEASLA 128
ALG A P G CLN K+EASLA
Sbjct: 206 ALGLMPSSAASPQLG-CLNVLKSEASLA 232
>04_03_0092 +
11079185-11079589,11081319-11081409,11081507-11081612,
11081694-11081976,11082062-11082210,11083582-11083735,
11083837-11084793
Length = 714
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 3 TRYERNRSFGHLVHALGRAAGGAKLPSAGL 92
T ERN FG HA+G + G L S GL
Sbjct: 450 TPEERNIRFGVREHAMGAISNGIALHSPGL 479
>03_05_0823 -
27970038-27970258,27970279-27970544,27970608-27970657,
27971272-27971538,27971633-27972001,27972373-27973278
Length = 692
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 220 PHRSGARLVKSLCLEPPDSRGSTVSISLP 134
P RSG+ L S L + GSTVSI+LP
Sbjct: 184 PSRSGSSLQLSHTLRHQITVGSTVSINLP 212
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 54 RAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQSDFTSRAPLR 215
RA LPS+G + A A+ + V + GG++Q + R P R
Sbjct: 25 RARPTVGLPSSGRARQLAVASAAQENRDNTAVDVHVNQDGGNQQGNAVQRRPRR 78
>03_01_0192 -
1534013-1535147,1535249-1535370,1535497-1535556,
1535666-1535764,1535839-1535889,1535974-1536175,
1536709-1536911,1537264-1537350,1537435-1537589,
1537640-1537723,1538121-1538325,1538497-1538724
Length = 876
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 369 TPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSP 247
T R++ +S + + P + VSP+ + AVA +P ++P
Sbjct: 16 TARKDEAASCNAATPPKPSPVSPEEMRAVARKFAEQPVQNP 56
>02_01_0304 +
2037718-2037939,2038169-2038384,2038862-2039329,
2039419-2040171
Length = 552
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 360 QERKSSTDYSEPRHRTEVSPDRIGAVAHALKN 265
Q+R S+D+SE R+R + P GA+ + K+
Sbjct: 318 QKRHKSSDFSETRNRKQSFPAISGAIQNEQKS 349
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,982,731
Number of Sequences: 37544
Number of extensions: 288438
Number of successful extensions: 1024
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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