Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_B06
(289 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 121 5e-28
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 121 5e-28
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 121 5e-28
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 121 5e-28
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 121 5e-28
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 121 5e-28
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 121 5e-28
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 119 2e-27
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 118 3e-27
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 4e-14
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 0.29
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 0.29
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 0.29
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 0.29
M26061-1|AAB69155.1| 860|Homo sapiens PDEA protein. 29 3.6
BC035909-1|AAH35909.1| 860|Homo sapiens phosphodiesterase 6A, c... 29 3.6
AY164483-1|AAO32796.1| 2459|Homo sapiens polycystic kidney disea... 28 6.3
AK098052-1|BAC05222.1| 471|Homo sapiens protein ( Homo sapiens ... 28 6.3
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 264 AVH 272
AVH
Sbjct: 69 AVH 71
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 264 AVH 272
AVH
Sbjct: 68 AVH 70
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 264 AVH 272
AVH
Sbjct: 67 AVH 69
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 264 AVH 272
AVH
Sbjct: 67 AVH 69
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 264 AVH 272
AVH
Sbjct: 69 AVH 71
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 264 AVH 272
AVH
Sbjct: 67 AVH 69
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 121 bits (291), Expect = 5e-28
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 264 AVH 272
AVH
Sbjct: 68 AVH 70
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 119 bits (286), Expect = 2e-27
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 264 AVH 272
AVH
Sbjct: 68 AVH 70
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 118 bits (284), Expect = 3e-27
Identities = 57/63 (90%), Positives = 58/63 (92%)
Frame = +3
Query: 84 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 263
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 264 AVH 272
AVH
Sbjct: 69 AVH 71
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 108 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 215
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 78 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 239
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 78 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 239
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 78 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 239
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 78 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 239
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>M26061-1|AAB69155.1| 860|Homo sapiens PDEA protein.
Length = 860
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 156 LTRAAKVLEQLTGQQPVFSKARYTVRSF 239
L +KV E+LT + F KA YTVR+F
Sbjct: 242 LWSGSKVFEELTDIERQFHKALYTVRAF 269
>BC035909-1|AAH35909.1| 860|Homo sapiens phosphodiesterase 6A,
cGMP-specific, rod, alpha protein.
Length = 860
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 156 LTRAAKVLEQLTGQQPVFSKARYTVRSF 239
L +KV E+LT + F KA YTVR+F
Sbjct: 242 LWSGSKVFEELTDIERQFHKALYTVRAF 269
>AY164483-1|AAO32796.1| 2459|Homo sapiens polycystic kidney disease
1-like 2 protein.
Length = 2459
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 199 CWPVSCSSTLAARVSLSPDSPTQMF 125
C PV+ S + RV++ DSP MF
Sbjct: 671 CRPVNASKDILLRVTMGEDSPVAMF 695
>AK098052-1|BAC05222.1| 471|Homo sapiens protein ( Homo sapiens
cDNA FLJ40733 fis, clone TKIDN2003059. ).
Length = 471
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 199 CWPVSCSSTLAARVSLSPDSPTQMF 125
C PV+ S + RV++ DSP MF
Sbjct: 151 CRPVNASKDILLRVTMGEDSPVAMF 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,164,027
Number of Sequences: 237096
Number of extensions: 700325
Number of successful extensions: 1318
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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