Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_B05
         (393 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   0.95 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   0.95 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   2.2  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 334  LRGSTAIPIVLAKEGFNPEALISRRVNP 251
            LRG TA  I++  E   PE  + R + P
Sbjct: 1153 LRGRTAQLIIVQAENAYPEVELDRELRP 1180


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 327  GQQQYQLFWPKKGSIQKPLFHVG*I--LCRHELL 232
            G  Q+++ WP KG  +  LFH   +  +  H++L
Sbjct: 1016 GNMQWKI-WPMKGEEKSRLFHYSVVPFVSNHDIL 1048


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 149 YSILLSTMTTSWLIKPCLH 93
           YSILLS + T  +  P +H
Sbjct: 3   YSILLSLLITCLICSPSVH 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,995
Number of Sequences: 438
Number of extensions: 2142
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)