Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_B03
         (217 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.10 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   5.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   6.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    19   6.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   8.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   8.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   8.8  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    19   8.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   8.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.10
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 90  KETFSSDSGLNKTNTAFAFSSMNTSVSTIKSTMIEVP 200
           K T  SDS L       AF S +TS++ I   + EVP
Sbjct: 843 KRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVP 879


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +1

Query: 34  HHFQCK 51
           HHFQC+
Sbjct: 432 HHFQCR 437


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -1

Query: 70  PNTSKMSCTENGAVYA 23
           P   +  C  NG +YA
Sbjct: 111 PRRHRPVCASNGKIYA 126


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 82  FIGLPNTSKMSCTENGAVYAQINKFLV 2
           F+G P  + +    NG ++  +  F V
Sbjct: 20  FLGGPQLTDVCSASNGELFLALLNFFV 46


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 133 VLVLFNPLSDENV 95
           VLV+ +P  D NV
Sbjct: 616 VLVVVSPFDDSNV 628


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 45  VQDILDVFGSPIKDFKE 95
           + + LD+FGSP   F +
Sbjct: 53  IGNALDLFGSPDAMFSQ 69


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 133 VLVLFNPLSDENV 95
           VLV+ +P  D NV
Sbjct: 616 VLVVVSPFDDSNV 628


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 127 VLFNPLSDENVSLKSFIGLPN 65
           VLF   + +NV +K  +  PN
Sbjct: 222 VLFALQTPDNVLIKELVVTPN 242


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 205 FGGTSIIVLLIVLTDVFIELNANAVLVL 122
           + G  I+V LIVL  V + +    VLV+
Sbjct: 60  WSGPWILVTLIVLAIVNVMVVLGNVLVI 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,129
Number of Sequences: 438
Number of extensions: 760
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)