Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A24
(432 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 29 0.23
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 0.93
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 2.8
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 3.8
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 5.0
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 5.0
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 6.6
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 6.6
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 6.6
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 6.6
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 25 6.6
SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|... 24 8.7
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 24 8.7
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 24 8.7
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 24 8.7
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 29.5 bits (63), Expect = 0.23
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +3
Query: 210 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 371
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 372 QQVSELSNSLQGA 410
+QVS L L+ A
Sbjct: 125 KQVSSLVRFLRFA 137
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 0.93
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 228 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 404
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 165 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 272
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 2.8
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 249 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 404
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLE 1386
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 3.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 234 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 401
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 5.0
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 195 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 365
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 279 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 398
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 6.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 322 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 206
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 6.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 122 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 220
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 108 CFYLATSLRTRTDSDTAMAAKCFVLFAC 191
CF T R D + + A C LF C
Sbjct: 83 CFICTTEKIKREDYELTLCANCGYLFCC 110
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 6.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 319 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 212
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 120 PGKNNAQHTHTHAQRERDTRYKSE 49
P KNN QH H + T KS+
Sbjct: 67 PSKNNIQHLHPNTSEPFKTSSKSD 90
>SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|chr
3|||Manual
Length = 418
Score = 24.2 bits (50), Expect = 8.7
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +3
Query: 39 AVFIHSCIACLSLSVRVCVCAVHCFYLATSLRTRTDSDTAMAAKCFVLFACV 194
AVF+ C+ ++ + CV + + A CF+LF CV
Sbjct: 176 AVFLAKCVKVTAVFLAKCVKVIAVGLYNSKKDLVVTIWLAWVVICFILFGCV 227
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 285 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS 398
I +Q N +I N KNT N + K + + +S +SNS
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNS 521
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 24.2 bits (50), Expect = 8.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 135 FEAKLPGKNNAQHTHTHAQRERDTRY---KSE*TPRS 34
FE+ PG N Q + +H +R+ + S+ TPRS
Sbjct: 62 FESSSPGPNIPQSSRSHLLSQRNDLFLDSSSQRTPRS 98
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 24.2 bits (50), Expect = 8.7
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +3
Query: 246 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 404
Q ++K + +KT+SE + + + N+ LKE + S V + + +L+
Sbjct: 582 QQIDKFSTFIRKTLSETIDNLQLLTSPIVTNQVLKETAISFVGAIETVDKALE 634
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,421,635
Number of Sequences: 5004
Number of extensions: 21348
Number of successful extensions: 101
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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