Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A23
(300 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 31 0.036
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 30 0.063
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 0.26
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 27 0.45
SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase Ceg1|Schizosacc... 27 0.59
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 1.0
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 26 1.0
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 26 1.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 26 1.4
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 25 1.8
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 25 3.1
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 25 3.1
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 24 4.2
SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr ... 24 4.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 24 4.2
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 24 5.5
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 23 7.3
SPAP8A3.10 |||mitochondrial intermembrane space protein sorting ... 23 7.3
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 23 7.3
SPAC3A12.11c |cwf2|prp3|RNA-binding protein Cwf2|Schizosaccharom... 23 9.6
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 23 9.6
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 23 9.6
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 23 9.6
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 31.1 bits (67), Expect = 0.036
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = +2
Query: 5 EADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSI 184
+ +S E+K ++ ET PVT++ L E K E+ +V + + K+ + D +++
Sbjct: 244 QVESKEVKKKEVSETTEPTAPPVTVAEVLEIEDKVPKVDEVEEVHSPEA-KVTENDVENV 302
Query: 185 AQDIAKSKDVSTSDNSGTKSK 247
I K + +N S+
Sbjct: 303 QSGIDIEKTIQLLNNQEIPSE 323
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 30.3 bits (65), Expect = 0.063
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 8 ADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSIA 187
A+ NE + DE + P + +L +++N+D + +K + + ++ AD+
Sbjct: 458 ANENETEIASLDEGSESKPTPSPPAEQLTDQKQNEDNEDKVKADSNGPTQNENETADASK 517
Query: 188 QDIAKSKDVSTSDNS 232
I++ K +DNS
Sbjct: 518 DMISEEKSSKDADNS 532
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 28.3 bits (60), Expect = 0.26
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +2
Query: 89 LRSERKNDDEPELMKVFARRSLKI----KDTD---ADSIAQDIAKSKDVSTSDNSGTKSK 247
LR +R+ DD+ +L ++ +S D D +DSIA+ KS G K K
Sbjct: 191 LRKKRRRDDDIDLSGLYETKSSSPPAIHSDEDPSYSDSIARSPVKSAFNLRKRRKGVKEK 250
Query: 248 LLKNEFNASIKSRDSDN 298
+ +++ K SDN
Sbjct: 251 KILKTYHSQDKDTASDN 267
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 27.5 bits (58), Expect = 0.45
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 149 SLKIKDTDADSIAQDIAKSKDV-STSDNSGTK-SKLLKNEFNASIKSRDSD 295
SL +++TDA SI I K KD+ + G K SK+L N + + DSD
Sbjct: 346 SLDLEETDAFSILSLIKKEKDMFDRFEALGIKSSKVLDIVTNEAFANEDSD 396
>SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase
Ceg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 27.1 bits (57), Expect = 0.59
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 44 ETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLK 157
E RKKP R+L E NDD P + KV A+ S K
Sbjct: 365 EAYYNRKKPSVTKRKL-DETSNDDAPAIKKV-AKESEK 400
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.2 bits (55), Expect = 1.0
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 20 EIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSIAQD-I 196
E+++ D+ VV + ++ + E +DE L + +RR D+D +D
Sbjct: 690 ELESNSSDDDVVEVHRELSHNSSSNDEDDGNDEDPLSREMSRRLSFESANDSDQDNRDHF 749
Query: 197 AKSKDVSTSDNSGTKSKLLKNEFNASIKSRDSDN 298
A+ SDN+ N+F++S + D D+
Sbjct: 750 AQYMSQQISDNNA-------NQFSSSDEDDDDDD 776
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 1.0
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 107 NDDEPELMKVFARRSLKIKDTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNEFNA 271
+D++ +++ + +TD + A+ A +D S +D S TKS + NE A
Sbjct: 169 HDNKKKIINSNISNAPPFNNTDVQASARPPAAGQDDSAADASTTKSSPVHNEVMA 223
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 25.8 bits (54), Expect = 1.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 137 FARRSLKIKDTDADSIAQDIAKSKDVSTSDNSGTKSK 247
FAR +DTD+D +D KS V S S K
Sbjct: 239 FARAPASSEDTDSDGQMEDEEKSDSVHKSSFSSPSKK 275
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.8 bits (54), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 80 SRELRSERKNDDEPELMKVFARRSLKIKDTDADSIAQDIAKSKDVSTS 223
S +L SE +NDD+P L+ + ++K KD + + K K STS
Sbjct: 590 SLQLLSESENDDKP-LIDLIPLLAIKRKDNLVSGV---LEKGKSTSTS 633
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 164 DTDADSIAQDIAKSKDVSTSDNSGTKSKLLK 256
D D D+I +D+ K + N K++LLK
Sbjct: 89 DADEDTIVKDLKKELENEKKANHSLKNELLK 119
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 155 KIKDTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNE 262
K+ +++ SI I K K +S DN+ K +KNE
Sbjct: 932 KLITSESASIQSLIKKCKTLSIVDNTFDSDKCVKNE 967
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 170 DADSIAQDIAKSKDVSTSDNS--GTKSKLLKNEFNASIKSRD 289
D+D D+++S DV DNS + SK+ + ASIK +
Sbjct: 97 DSDYATSDLSESSDVGDDDNSCIFSFSKVPMQKDVASIKEEE 138
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 4.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 29 NEKHDETVVYRKKPVTLSRELRSERKNDDEPEL 127
NE+ ET +PV+ +E E+K EPE+
Sbjct: 421 NEEKVETPKPEAQPVSKPKESAEEQKPSKEPEV 453
>SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 238
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 196 YILSDTVSVCIFDFEGST 143
+I+ TV V +F+F+GST
Sbjct: 203 FIVHSTVPVPVFEFQGST 220
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 24.2 bits (50), Expect = 4.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 104 KNDDEPELMKVFARRSLKIKDTDADSIAQD 193
K DEP ++AR + K+ D+ DSI +
Sbjct: 1057 KATDEPNFSNMYARFARKMMDSIDDSIRDE 1086
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 62 KKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSIAQD 193
++PV S E +E+K D+ ++ KV ++ +K+ D S+ +D
Sbjct: 509 EEPVETSPEEEAEKKTDEPVKMRKV--KKLVKVADLSV-SVQED 549
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 149 SLKIKDTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNEFNASIKSR 286
S K+K+ + D++ + +D + +SGT+S F I R
Sbjct: 306 SCKVKEFEKDALELEEQTMEDEKSYPSSGTQSPFYGKNFLPQITPR 351
>SPAP8A3.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 138 SHVDPSKSKIQTLTVSLKI*LNLRTCLHPIIVEQKVNYSKT 260
S +DPSK ++++ T +L LR + ++ N SKT
Sbjct: 81 SVIDPSKQELKSETFNLDHVKILRVIEYSRFIQSSENCSKT 121
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 247 FTFCSTIIGCRHVLRFSYILSDTVSV 170
F CST VL Y+LSD + +
Sbjct: 1893 FVCCSTTTNSAFVLVIHYLLSDVLQI 1918
>SPAC3A12.11c |cwf2|prp3|RNA-binding protein
Cwf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3
Query: 154 EGSTCEHLHQL 122
EGS CE+LH+L
Sbjct: 127 EGSKCEYLHRL 137
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 23.0 bits (47), Expect = 9.6
Identities = 5/13 (38%), Positives = 12/13 (92%)
Frame = -3
Query: 40 MFLIFDFVAVCLV 2
+FL+F+++ +CL+
Sbjct: 641 LFLVFEYILICLI 653
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 23.0 bits (47), Expect = 9.6
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +2
Query: 11 DSNEIKNEKHDETVVYRKKPVTLSRELR--SERKNDDEPEL-MKVFARRSLKIKDTDADS 181
+SN K + D+T V K P +L R R +++ + +L +V + I TD S
Sbjct: 306 ESNLRKRKVSDKTRVVNKHPPSLRRSRRFFAKKSYNHVSDLDGEVIVMKKEDI--TDGVS 363
Query: 182 IAQDI--AKSKDVSTSDNSGTKS-KLLKNEFNASIKSR 286
+D+ +V D + S LL NE AS K R
Sbjct: 364 TKKDLNDGDQNEVPLHDTGSSSSLSLLYNEDVASKKKR 401
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 23.0 bits (47), Expect = 9.6
Identities = 6/24 (25%), Positives = 17/24 (70%)
Frame = +3
Query: 18 TKSKMRNMMKPSYIVKNQSHYQEN 89
TK ++++ Y++++ SH+++N
Sbjct: 616 TKEHLQSLHPNIYVIRSPSHFRQN 639
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 929,474
Number of Sequences: 5004
Number of extensions: 15000
Number of successful extensions: 69
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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