Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A23
(300 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0248 - 14757365-14757426,14758550-14758991 31 0.22
01_07_0010 + 40429613-40429677,40429702-40430015,40432150-40434386 29 0.51
11_07_0006 - 27252755-27253303,27253324-27253748,27253833-272542... 29 0.67
09_02_0275 + 6619030-6619161,6619277-6619766,6620609-6621034,662... 29 0.67
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 29 0.89
11_06_0545 + 24839536-24843421,24843871-24844310 28 1.2
11_06_0184 - 21006659-21009823 28 1.2
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 28 1.2
01_07_0019 + 40494709-40494767,40495619-40495703,40495777-404958... 28 1.2
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 28 1.6
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 28 1.6
01_01_0104 + 780442-781273,782514-783424 28 1.6
03_05_0186 + 21731294-21732277 27 2.1
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 27 2.7
03_02_0507 - 8999902-9000649,9001106-9001225,9001314-9001394,900... 27 3.6
11_06_0442 - 23622633-23623000,23623149-23623721,23624795-236253... 26 4.7
07_03_0203 + 15138864-15140452,15140629-15140726,15141924-151422... 26 4.7
07_03_0698 - 20765305-20768526 26 6.3
04_04_0838 - 28550036-28550237,28550595-28550676,28550972-285510... 26 6.3
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 26 6.3
02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537 26 6.3
11_06_0377 - 22900042-22900452,22900527-22902236 25 8.3
09_02_0419 + 9046090-9046333,9046451-9046634,9046733-9046947,904... 25 8.3
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 25 8.3
06_03_1487 + 30477615-30477658,30477778-30477891,30477941-304780... 25 8.3
01_07_0105 - 41104655-41104851,41105818-41107150 25 8.3
>08_02_0248 - 14757365-14757426,14758550-14758991
Length = 167
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 164 DTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNEFNASIKSRDS 292
D A + AQD+++S ST +SG K + + + SRDS
Sbjct: 101 DEAAAAAAQDLSRSSSSSTGGSSGRKGRKGDSSVEGDLSSRDS 143
>01_07_0010 + 40429613-40429677,40429702-40430015,40432150-40434386
Length = 871
Score = 29.5 bits (63), Expect = 0.51
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELM-------KVFARRSLKI 160
HE S+ + + V++R+K VT E R +++ ++ KV + +
Sbjct: 425 HEQASSSLGSSSSAAKVIHRRKAVTKEMEAEKRRCINNKSKVSGQKNNTNKVVGKSTSSA 484
Query: 161 KDTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNEFNA 271
D D+ AK K S+ SGTK + + ++ N+
Sbjct: 485 ADGDSGP-QMHPAKRKSASSIGTSGTKRRKMPSDHNS 520
>11_07_0006 -
27252755-27253303,27253324-27253748,27253833-27254258,
27255101-27255590,27255706-27255837
Length = 673
Score = 29.1 bits (62), Expect = 0.67
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKD-TDAD 178
H + + +N + E R P T+ +++ K +L ++ R K+K D++
Sbjct: 16 HPREQEQQENAEEGEEQRPRPTPTTMEKKVVEPSKKKKFVDLKSMWGRAEKKLKSIVDSN 75
Query: 179 SIAQDIAKSKD 211
+I++ A+ KD
Sbjct: 76 NISEHSARRKD 86
>09_02_0275 +
6619030-6619161,6619277-6619766,6620609-6621034,
6621119-6621543,6621564-6622112
Length = 673
Score = 29.1 bits (62), Expect = 0.67
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKD-TDAD 178
H + + +N + E R P T+ +++ K +L ++ R K+K D++
Sbjct: 16 HPREQEQQENAEEGEEQRPRPTPTTMEKKVVEPSKKKKFVDLKSMWGRAEKKLKSIVDSN 75
Query: 179 SIAQDIAKSKD 211
+I++ A+ KD
Sbjct: 76 NISEHSARRKD 86
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 28.7 bits (61), Expect = 0.89
Identities = 24/98 (24%), Positives = 44/98 (44%)
Frame = +2
Query: 5 EADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSI 184
E+ S E + H+E+ + K T S ++ + DDE + + S + K+ D +
Sbjct: 2201 ESKSQEFSCKDHEESPKHPKVHCTGSSAHVTKEETDDESQQIHGDQFVSRESKNYDL-YL 2259
Query: 185 AQDIAKSKDVSTSDNSGTKSKLLKNEFNASIKSRDSDN 298
+ +IA S +D SG + + + +I S D N
Sbjct: 2260 SNEIAGSAGEEENDTSGEIRRATGDALDENISSVDDSN 2297
>11_06_0545 + 24839536-24843421,24843871-24844310
Length = 1441
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 131 KVFARRSLKIKDTDADSIAQDIAKSKDVSTSDNSGT 238
+VF + L +++TD + ++I K +D+ T D GT
Sbjct: 961 RVFQLKYLSLRNTDIAELPKEINKLQDLETFDMRGT 996
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADS 181
H A+SN IK + + R L E R K D + K+ + L +++TD
Sbjct: 687 HPANSN-IKKFLNSLSSSSRLLLTVLDLEGRKGLKAGDLHTVCKIHKLKYLSLRNTDIAQ 745
Query: 182 IAQDIAKSKDVSTSDNSGTK 241
+ ++I + K + T D GT+
Sbjct: 746 LPKEIGQLKLLETLDIRGTR 765
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +2
Query: 98 ERKNDDEPELMKVFARRSLKIKDTDADSIAQDIAKS------KDVSTSDNSGTKS 244
+ + +DE + ARR+ K + T+A+S +A S ++++S +SGT +
Sbjct: 316 DEEEEDEDDEFSQLARRNSKFRSTNAESTPSGVATSLSTAHDDEITSSGSSGTST 370
>01_07_0019 +
40494709-40494767,40495619-40495703,40495777-40495836,
40495934-40496044,40496127-40496204,40496276-40496347,
40496944-40497057,40498034-40498538,40499011-40499108,
40499185-40499215,40499346-40499520,40499849-40500008,
40501436-40501855,40502313-40503203
Length = 952
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 29 NEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSIAQDIAKSK 208
NE TVV K+ + + + ++NDDE + + + ++ D DS A+D A S
Sbjct: 183 NESGLRTVVCVKRRKSRKQSTEAAKENDDEDDEGPADSEDASMGEEDDEDSEAKDNAGSD 242
Query: 209 DVSTSDNSGTKSKLLKNEFNASIKSRDS 292
+ D K K ++ K +D+
Sbjct: 243 E--EPDEPPAKKKATDDKQTKKAKEKDA 268
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 27.9 bits (59), Expect = 1.6
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +2
Query: 11 DSNEIKNEKHD---ETVVYRKKPVTLSRELRSERK----NDDEPELMKVFARRSLKIKDT 169
DS E K+ D E K+P +R L+ + +DDEPE KV R+ +
Sbjct: 385 DSMEFKHPARDVATEAPPSYKEPNFETRALQHSKVKLTWDDDEPERKKVLRRKFTDDQLD 444
Query: 170 DADSIAQDIAKSKDVSTSDNSGTKS 244
D D + D +DN G +S
Sbjct: 445 DLDMYLASDDSASDDEGADNHGDES 469
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 95 SERKND-DEPELMKVFARRSLKIKD-TDADSIAQDIAKSKDVSTSDNSGTKSKLLKNE 262
++ ND D+ E + A++S K K +AD A D+ K +V+ GT+ K K +
Sbjct: 433 NDATNDVDDGEKVDASAKKSKKKKSKAEADGEAMDLDKPSNVADEAEPGTEKKKKKKK 490
>01_01_0104 + 780442-781273,782514-783424
Length = 580
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 241 FCSTIIGCRHVLRFSYILSDTVSVCIFDFEGSTCEHL 131
FCS G RH+L + ++ ++++ CIF + +T + L
Sbjct: 398 FCSE--GTRHILIYEFMPNESLEKCIFLHDPNTSQEL 432
>03_05_0186 + 21731294-21732277
Length = 327
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 205 RFSYILSDTVSVCIFDFEGSTCEHLHQLRF 116
R + IL D + C+ DF+GS ++L F
Sbjct: 156 RVNQILEDMLRACVLDFDGSCYKNLPYAEF 185
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +2
Query: 95 SERKNDDEPELMKVFARRSLKIKDTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNEFNA 271
S +K DD+ ++ R DTD D D KS D D K K KN +A
Sbjct: 433 SSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKS-DSEEDDYDSEKEKAKKNSSDA 490
>03_02_0507 -
8999902-9000649,9001106-9001225,9001314-9001394,
9001591-9001613
Length = 323
Score = 26.6 bits (56), Expect = 3.6
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADS 181
++ S+E +E D+ R+K R+ R+ ++ LK+K +
Sbjct: 210 YDDSSDESNSESDDKESKRRRKEEKRLRKEERRRRREERHRRKADRQASKLKLKHAETVD 269
Query: 182 IAQDIAKSKDVSTSDNSGTK 241
+A D+ K ++ S SD K
Sbjct: 270 MASDLEKDRE-SDSDADARK 288
>11_06_0442 -
23622633-23623000,23623149-23623721,23624795-23625335,
23625807-23625982,23626081-23626804
Length = 793
Score = 26.2 bits (55), Expect = 4.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 135 CSHVDPSKSKIQTLTVSLKI*LNLRTCLHPIIV 233
CS DPS ++ + L + +I NL + +HP ++
Sbjct: 550 CSTFDPSGNEYKALILEYRINGNLESWIHPKVL 582
>07_03_0203 +
15138864-15140452,15140629-15140726,15141924-15142235,
15142437-15142749,15144025-15146023,15147033-15147068
Length = 1448
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 238 CSTIIGCRHVLRFSYI-LSDTVSVCI 164
CST G RH L SYI L + + C+
Sbjct: 902 CSTFQGIRHTLNLSYINLPNYLKTCL 927
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 25.8 bits (54), Expect = 6.3
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 2 HEADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADS 181
H A+SN I + + R L E R K +D + K+ + L +++TD
Sbjct: 711 HPANSN-ITRFLNSLSSTSRLLLTVLDLEGRKGLKANDLHTVCKIHKLKYLSLRNTDVAQ 769
Query: 182 IAQDIAKSKDVSTSDNSGTK 241
+ + I + + + T D GT+
Sbjct: 770 LPKQIGQLRLLETLDIRGTR 789
>04_04_0838 -
28550036-28550237,28550595-28550676,28550972-28551011,
28551342-28551416,28551448-28551543,28551710-28551805,
28551897-28551974,28552064-28552170,28552450-28552477,
28552777-28552898,28554106-28554172,28554336-28554508,
28554763-28554846,28555616-28555733,28556093-28556164,
28557026-28557118,28557484-28557636,28558000-28558086,
28559436-28559528,28560416-28560643,28561106-28561207,
28561390-28561596,28561798-28561846,28562385-28562537,
28562649-28562712,28562905-28563175,28564008-28564072,
28564184-28564337
Length = 1052
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 164 DTDADSIAQDIAKSKDVSTSDNSGTKSKLLKNE 262
+TD D + QD+A KD+ ++ G L++ E
Sbjct: 874 ETDVDLMHQDLAMIKDLFIAEGQGLPLDLVEKE 906
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 104 KNDDEPELMKVFARRSLKIKD-TDADSIAQDIAKSKDVSTSDNSGTKSKLLKNEFNASIK 280
K DE + K + L +K+ S+++ AK+K DN+G+K K + + + +
Sbjct: 426 KQKDETD-SKEDTAKDLSLKEMVSPKSVSKGSAKTKGSQGQDNNGSKRKRSQEDEQETPR 484
Query: 281 SR 286
SR
Sbjct: 485 SR 486
>02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537
Length = 900
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +2
Query: 125 LMKVFARRSLKIKDTDADSIAQDIAKSKDVSTSDNSGTK 241
+ ++F R L +++TD +I+ I++ + + T + GT+
Sbjct: 610 ICRLFLLRFLSLRNTDVSTISSQISRLQHLQTLNLYGTR 648
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 11 DSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMK 133
D ++ HD+ R+ V L+ LR+ K+DD+ ELM+
Sbjct: 301 DDQGLRGGAHDDPDEPRRGRVLLT--LRARLKDDDDEELMR 339
>09_02_0419 +
9046090-9046333,9046451-9046634,9046733-9046947,
9047261-9047384,9047462-9047633
Length = 312
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 113 DEPELMKVFARRSLKIK 163
D+P L K++A+R LK+K
Sbjct: 126 DDPALHKIYAQRELKLK 142
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 110 DDEPELMKVFARRSLKIKDTDADSIAQDIAKSKDV 214
+D+P+L KVFAR + D +AD + DI +D+
Sbjct: 211 NDDPDLAKVFARTKFLVLD-EADRVL-DINFEEDL 243
>06_03_1487 +
30477615-30477658,30477778-30477891,30477941-30478028,
30478186-30478230,30478330-30478410,30478498-30478608,
30478907-30478927
Length = 167
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 8 ADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADS 181
A +N++K E + Y K T + E + DDE E K ++ + +D D S
Sbjct: 104 AKANKLKAEYNKAIAAYNKGESTAKKAPAKEEEEDDEEESDK--SKSEVNDEDDDEGS 159
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 25.4 bits (53), Expect = 8.3
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +2
Query: 5 EADSNEIKNEKHDETVVYRKKPVTLSRELRSERKNDDEPELMKVFARRSLKIKDTDADSI 184
E E KN++ T +K+ V ++ E+K D + + F + KI TDA +
Sbjct: 132 EKKKEEAKNKQEAVTDDKKKEKVIPTKVAIDEKKEDVVVPMKEEFVKEKEKI--TDAKN- 188
Query: 185 AQDIAKSKDVSTSD 226
D+A +++V+ D
Sbjct: 189 --DVASTENVAAVD 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,238,251
Number of Sequences: 37544
Number of extensions: 76288
Number of successful extensions: 286
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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