Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_A23
         (300 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.1  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   2.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   2.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   3.3  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   3.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   3.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   5.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   5.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   5.7  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             20   5.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 89  LRSERKNDDEPELMKV 136
           L  E++NDD+P L+K+
Sbjct: 475 LLEEQRNDDKPFLIKI 490


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 89  LRSERKNDDEPELMKV 136
           L  E++NDD+P L+K+
Sbjct: 475 LLEEQRNDDKPFLIKI 490


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 137 FARRSLKIKDTDADSIAQDIAKSKDVSTSDNSGTKSKLLK 256
           F  R+ K+   D++ + + +   KD++ S++    SKLL+
Sbjct: 84  FRERTTKL---DSEQVNRLVNNCKDITESNSCKKSSKLLQ 120


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 213 CLHPIIVEQKVNYS 254
           C HP+IV Q V +S
Sbjct: 66  CKHPVIVLQDVAFS 79


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 DVSTSDNSGTKSKLLKNEFNASIKS 283
           D+   +N   K  +  N FN+ IKS
Sbjct: 516 DLKAFNNVPKKLNMFYNNFNSDIKS 540


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 241 FCSTIIGCRHVLRFSYILSDTVSVCIF 161
           FC T IGC+     + IL D +    F
Sbjct: 163 FCETTIGCKD-KNMAPILKDLMETSYF 188


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 DVSTSDNSGTKSKLLKNEFNASIKS 283
           D+   +N   K  +  N FN+ IKS
Sbjct: 516 DLKAFNNVPKKLNMFYNNFNSDIKS 540


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 174 LTVSLKI*LNLRTCLHP 224
           L VSL+I L  RTC +P
Sbjct: 126 LLVSLRIDLPWRTCGNP 142


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 174 LTVSLKI*LNLRTCLHP 224
           L VSL+I L  RTC +P
Sbjct: 179 LLVSLRIDLPWRTCGNP 195


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 160 DFEGSTCEHLHQLRFIVV 107
           DF   T E  H+  F+VV
Sbjct: 272 DFRDRTTEQQHKAMFLVV 289


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 160 DFEGSTCEHLHQLRFIVV 107
           DF   T E  H+  F+VV
Sbjct: 267 DFRDRTTEQQHKAMFLVV 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,530
Number of Sequences: 438
Number of extensions: 856
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)