Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A17
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for ... 32 0.82
Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for ... 32 0.82
M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common ant... 32 0.82
AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosph... 32 0.82
AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosph... 32 0.82
AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosph... 32 0.82
AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosph... 32 0.82
BC117313-1|AAI17314.1| 1235|Homo sapiens AP1GBP1 protein protein. 30 4.4
BC090930-1|AAH90930.1| 1224|Homo sapiens AP1GBP1 protein protein. 30 4.4
AF169548-1|AAD49732.1| 1314|Homo sapiens gamma-synergin protein. 30 4.4
>Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for
leukocyte common antigen (T200). ).
Length = 1304
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1230 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1288
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1289 EHSVNGPA 1296
>Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for T200
leukocyte common antigen (CD45, LC-A). ).
Length = 1143
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1069 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1127
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1128 EHSVNGPA 1135
>M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common antigen
precursor protein.
Length = 1114
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1040 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1098
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1099 EHSVNGPA 1106
>AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1232 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1290
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1291 EHSVNGPA 1298
>AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1071 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1129
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1130 EHSVNGPA 1137
>AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1232 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1290
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1291 EHSVNGPA 1298
>AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 265 QNSDIPYKNNHEQEKTIGDREISNI-----CKEPTEAKIKTPEIFIQSDSVEFTNYTLG- 426
QN + KNNH+++K D E+ + C P A K PE Q++ E T+ T G
Sbjct: 1071 QNGQVK-KNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLPEAKEQAEGSEPTSGTEGP 1129
Query: 427 SHRNSGDA 450
H +G A
Sbjct: 1130 EHSVNGPA 1137
>BC117313-1|AAI17314.1| 1235|Homo sapiens AP1GBP1 protein protein.
Length = 1235
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 190 MARFYFAIAMREEPNKNKDKYEKIEQNS-DIPYKNNHEQEKTIGDREISNICKEP 351
+++F F +A + K+ ++ K E + D+ + +H++ ++GD+EIS P
Sbjct: 955 ISKFDFLVATSQSKMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKEISRSSPSP 1009
>BC090930-1|AAH90930.1| 1224|Homo sapiens AP1GBP1 protein protein.
Length = 1224
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 190 MARFYFAIAMREEPNKNKDKYEKIEQNS-DIPYKNNHEQEKTIGDREISNICKEP 351
+++F F +A + K+ ++ K E + D+ + +H++ ++GD+EIS P
Sbjct: 956 ISKFDFLVATSQSKMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKEISRSSPSP 1010
>AF169548-1|AAD49732.1| 1314|Homo sapiens gamma-synergin protein.
Length = 1314
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 190 MARFYFAIAMREEPNKNKDKYEKIEQNS-DIPYKNNHEQEKTIGDREISNICKEP 351
+++F F +A + K+ ++ K E + D+ + +H++ ++GD+EIS P
Sbjct: 1034 ISKFDFLVATSQSKMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKEISRSSPSP 1088
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.129 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,523,216
Number of Sequences: 237096
Number of extensions: 1176204
Number of successful extensions: 1890
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1890
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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