Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A16
(200 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533522-1|CAG38553.1| 414|Homo sapiens IDH1 protein. 60 2e-09
CR541695-1|CAG46496.1| 414|Homo sapiens IDH1 protein. 59 3e-09
CR536499-1|CAG38738.1| 414|Homo sapiens IDH1 protein. 59 3e-09
BX537411-1|CAD97653.1| 414|Homo sapiens hypothetical protein pr... 59 3e-09
BC093020-1|AAH93020.1| 414|Homo sapiens isocitrate dehydrogenas... 59 3e-09
BC012846-1|AAH12846.1| 414|Homo sapiens IDH1 protein protein. 59 3e-09
AF113917-1|AAD29284.1| 414|Homo sapiens NADP+-dependent isocitr... 59 3e-09
AF020038-1|AAD02918.1| 414|Homo sapiens NADP-dependent isocitra... 59 3e-09
AC016697-3|AAX93221.1| 414|Homo sapiens unknown protein. 59 3e-09
X69433-1|CAA49208.1| 452|Homo sapiens isocitrate dehydrogenase... 54 6e-08
BC071828-1|AAH71828.1| 452|Homo sapiens isocitrate dehydrogenas... 54 6e-08
BC009244-1|AAH09244.1| 452|Homo sapiens isocitrate dehydrogenas... 54 6e-08
AK222916-1|BAD96636.1| 452|Homo sapiens isocitrate dehydrogenas... 54 6e-08
>CR533522-1|CAG38553.1| 414|Homo sapiens IDH1 protein.
Length = 414
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI+P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIIPYVELDLH 40
>CR541695-1|CAG46496.1| 414|Homo sapiens IDH1 protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>CR536499-1|CAG38738.1| 414|Homo sapiens IDH1 protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>BX537411-1|CAD97653.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>BC093020-1|AAH93020.1| 414|Homo sapiens isocitrate dehydrogenase 1
(NADP+), soluble protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>BC012846-1|AAH12846.1| 414|Homo sapiens IDH1 protein protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>AF113917-1|AAD29284.1| 414|Homo sapiens NADP+-dependent isocitrate
dehydrogenase protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>AF020038-1|AAD02918.1| 414|Homo sapiens NADP-dependent isocitrate
dehydrogenase protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>AC016697-3|AAX93221.1| 414|Homo sapiens unknown protein.
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 86 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELH 196
KI G VV++ GDEMTRIIW+LIKEKLI P+++++LH
Sbjct: 4 KISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLH 40
>X69433-1|CAA49208.1| 452|Homo sapiens isocitrate dehydrogenase
(NADP+) protein.
Length = 452
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 68 RIYNMSKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIEL 193
R Y +IK A PVV++ GDEMTRIIW IKEKLILP +DI+L
Sbjct: 37 RHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQL 79
>BC071828-1|AAH71828.1| 452|Homo sapiens isocitrate dehydrogenase 2
(NADP+), mitochondrial protein.
Length = 452
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 68 RIYNMSKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIEL 193
R Y +IK A PVV++ GDEMTRIIW IKEKLILP +DI+L
Sbjct: 37 RHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQL 79
>BC009244-1|AAH09244.1| 452|Homo sapiens isocitrate dehydrogenase 2
(NADP+), mitochondrial protein.
Length = 452
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 68 RIYNMSKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIEL 193
R Y +IK A PVV++ GDEMTRIIW IKEKLILP +DI+L
Sbjct: 37 RHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQL 79
>AK222916-1|BAD96636.1| 452|Homo sapiens isocitrate dehydrogenase 2
(NADP+), mitochondrial precursor variant protein.
Length = 452
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 68 RIYNMSKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIEL 193
R Y +IK A PVV++ GDEMTRIIW IKEKLILP +DI+L
Sbjct: 37 RHYADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQL 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,297,332
Number of Sequences: 237096
Number of extensions: 356641
Number of successful extensions: 470
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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