Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A11
(374 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80040-1|AAB38416.1| 780|Homo sapiens mitochondrial aconitase p... 169 3e-42
U87939-1|AAC39921.1| 780|Homo sapiens aconitate hydratase protein. 167 8e-42
CR536568-1|CAG38805.1| 780|Homo sapiens ACO2 protein. 167 8e-42
CR456365-1|CAG30251.1| 780|Homo sapiens ACO2 protein. 167 8e-42
BC026196-1|AAH26196.1| 780|Homo sapiens aconitase 2, mitochondr... 167 8e-42
BC014092-1|AAH14092.1| 780|Homo sapiens aconitase 2, mitochondr... 167 8e-42
AL023553-4|CAI20278.1| 780|Homo sapiens aconitase 2, mitochondr... 167 8e-42
AL023553-3|CAM28239.1| 805|Homo sapiens aconitase 2, mitochondr... 167 8e-42
AL008582-4|CAI17931.1| 780|Homo sapiens aconitase 2, mitochondr... 167 8e-42
AL008582-3|CAM25244.1| 805|Homo sapiens aconitase 2, mitochondr... 167 8e-42
AF093096-1|AAD19351.2| 780|Homo sapiens aconitase protein. 167 8e-42
AF086790-1|AAC35557.1| 600|Homo sapiens aconitase precursor pro... 161 7e-40
BC044590-1|AAH44590.1| 418|Homo sapiens ARP3 actin-related prot... 31 0.92
BC008682-1|AAH08682.1| 418|Homo sapiens ARP3 actin-related prot... 31 0.92
AF127773-1|AAD51904.1| 418|Homo sapiens unknown protein. 31 0.92
AF023453-1|AAC98904.1| 418|Homo sapiens actin-related protein 3... 31 0.92
AF006083-1|AAB64188.1| 418|Homo sapiens Arp3 protein. 31 0.92
AC110769-1|AAX93226.1| 418|Homo sapiens unknown protein. 31 0.92
AB209353-1|BAD92590.1| 369|Homo sapiens ARP3 actin-related prot... 31 0.92
AB209174-1|BAD92411.1| 282|Homo sapiens actin-related protein 3... 31 0.92
BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein. 30 2.1
BC036050-1|AAH36050.1| 715|Homo sapiens coiled-coil domain cont... 30 2.1
BC011684-1|AAH11684.1| 490|Homo sapiens GATA zinc finger domain... 30 2.1
AY186731-1|AAO31797.1| 633|Homo sapiens p66 alpha protein. 30 2.1
AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology dom... 30 2.1
AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology dom... 30 2.1
AK000614-1|BAA91288.1| 216|Homo sapiens protein ( Homo sapiens ... 30 2.1
AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein. 30 2.1
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 30 2.8
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 29 4.9
CR456762-1|CAG33043.1| 655|Homo sapiens KATNB1 protein. 28 8.6
BT007022-1|AAP35668.1| 655|Homo sapiens katanin p80 (WD40-conta... 28 8.6
BC110493-1|AAI10494.1| 680|Homo sapiens KIAA1161 protein protein. 28 8.6
BC070098-1|AAH70098.1| 714|Homo sapiens KIAA1161 protein. 28 8.6
BC001353-1|AAH01353.1| 655|Homo sapiens katanin p80 (WD repeat ... 28 8.6
AL356494-2|CAI15965.1| 680|Homo sapiens KIAA1161 protein. 28 8.6
AF052432-1|AAC09328.1| 655|Homo sapiens katanin p80 subunit pro... 28 8.6
AB209250-1|BAD92487.1| 370|Homo sapiens katanin p80 subunit B 1... 28 8.6
AB032987-1|BAA86475.2| 680|Homo sapiens KIAA1161 protein protein. 28 8.6
>U80040-1|AAB38416.1| 780|Homo sapiens mitochondrial aconitase
protein.
Length = 780
Score = 169 bits (411), Expect = 3e-42
Identities = 74/98 (75%), Positives = 81/98 (82%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S+ VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSRQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>U87939-1|AAC39921.1| 780|Homo sapiens aconitate hydratase protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>CR536568-1|CAG38805.1| 780|Homo sapiens ACO2 protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>CR456365-1|CAG30251.1| 780|Homo sapiens ACO2 protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>BC026196-1|AAH26196.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>BC014092-1|AAH14092.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>AL023553-4|CAI20278.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>AL023553-3|CAM28239.1| 805|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 805
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 562 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 621
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 622 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 659
>AL008582-4|CAI17931.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>AL008582-3|CAM25244.1| 805|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 805
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 562 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 621
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 622 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 659
>AF093096-1|AAD19351.2| 780|Homo sapiens aconitase protein.
Length = 780
Score = 167 bits (407), Expect = 8e-42
Identities = 74/98 (75%), Positives = 80/98 (81%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+HPP D S VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 537 FDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 596
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAAGPWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 597 ISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 634
>AF086790-1|AAC35557.1| 600|Homo sapiens aconitase precursor
protein.
Length = 600
Score = 161 bits (391), Expect = 7e-40
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +2
Query: 77 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVNGKCTTDH 256
FDPGQDTY+ PP D S +VDVSP S RLQLL PFDKWDG DL ++ ILIKV GKCTTDH
Sbjct: 358 FDPGQDTYQQPPKDSSGQRVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDH 417
Query: 257 ISAAGPWLKYRGHLDNISNNMFITATNAENGELNKVRN 370
ISAA PWLK+RGHLDNISNN+ I A N ENG+ N VRN
Sbjct: 418 ISAAFPWLKFRGHLDNISNNLLIGAINIENGKANSVRN 455
>BC044590-1|AAH44590.1| 418|Homo sapiens ARP3 actin-related protein
3 homolog (yeast) protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 307 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKR 341
>BC008682-1|AAH08682.1| 418|Homo sapiens ARP3 actin-related protein
3 homolog B (yeast) protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 307 CPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKR 341
>AF127773-1|AAD51904.1| 418|Homo sapiens unknown protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 307 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKR 341
>AF023453-1|AAC98904.1| 418|Homo sapiens actin-related protein
3-beta protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 307 CPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKR 341
>AF006083-1|AAB64188.1| 418|Homo sapiens Arp3 protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 307 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKR 341
>AC110769-1|AAX93226.1| 418|Homo sapiens unknown protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 307 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKR 341
>AB209353-1|BAD92590.1| 369|Homo sapiens ARP3 actin-related protein
3 homolog variant protein.
Length = 369
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 258 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKR 292
>AB209174-1|BAD92411.1| 282|Homo sapiens actin-related protein
3-beta variant protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.92
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 158 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRQFVR 54
CPI V RPL L GG + D GR L R R
Sbjct: 171 CPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKR 205
>BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein.
Length = 1192
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 303 LSRCPLYLSQGPAAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDT 139
+ RC + +SQ P E W HL +L R IS +S P H S+ ++S ++ D+
Sbjct: 949 VQRCSVVVSQ-PNKENWCQDHLYNSLGRKGISAKSQPYHRSQSSSSVLINKSMDS 1002
>BC036050-1|AAH36050.1| 715|Homo sapiens coiled-coil domain
containing 13 protein.
Length = 715
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Frame = +1
Query: 127 GTSGRVTEIGQAATVGALRQVGRERPHR-----DDDPDQGQWQVHHRPHLGRWTLAQIQ 288
G+S VT +G AL + PHR D P+Q WQ W A+++
Sbjct: 501 GSSRSVTSLGHTLVESALTRPSLPSPHRTSPRFSDSPEQKGWQAQVSEIKALWQAAEVE 559
>BC011684-1|AAH11684.1| 490|Homo sapiens GATA zinc finger domain
containing 2A protein.
Length = 490
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 313 VGDVIEMPPVFEPGSSGRDVVGGALAIDLDQDRHLGEVVPVPLVEGRQQ 167
VG + PP G+ +++ G ++ R G V+P PLV G QQ
Sbjct: 40 VGSTVTTPPPLVRGT--QNIPAGKPSLQTSSARMPGSVIPPPLVRGGQQ 86
>AY186731-1|AAO31797.1| 633|Homo sapiens p66 alpha protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 313 VGDVIEMPPVFEPGSSGRDVVGGALAIDLDQDRHLGEVVPVPLVEGRQQ 167
VG + PP G+ +++ G ++ R G V+P PLV G QQ
Sbjct: 183 VGSTVTTPPPLVRGT--QNIPAGKPSLQTSSARMPGSVIPPPLVRGGQQ 229
>AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 303 LSRCPLYLSQGPAAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDT 139
+ RC + +SQ P E W HL +L R IS +S P H S+ ++S ++ D+
Sbjct: 1142 VQRCSVVVSQ-PNKENWCQDHLYNSLGRKGISAKSQPYHRSQSSSSVLINKSMDS 1195
>AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 303 LSRCPLYLSQGPAAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDT 139
+ RC + +SQ P E W HL +L R IS +S P H S+ ++S ++ D+
Sbjct: 1142 VQRCSVVVSQ-PNKENWCQDHLYNSLGRKGISAKSQPYHRSQSSSSVLINKSMDS 1195
>AK000614-1|BAA91288.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ20607 fis, clone KAT06217. ).
Length = 216
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +1
Query: 79 RPRSGYVRTPPRRRQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQWQVHH 249
RPRSG R P R G R GQ+ A G ER R P G H
Sbjct: 2 RPRSGPTRNPRLRAFAGVPTRGRTRGQSRRCAAEASAGPERDARPGAPAAGTMGAAH 58
>AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein.
Length = 1113
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 303 LSRCPLYLSQGPAAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDT 139
+ RC + +SQ P E W HL +L R IS +S P H S+ ++S ++ D+
Sbjct: 870 VQRCSVVVSQ-PNKENWCQDHLYNSLGRKGISAKSQPYHRSQSSSSVLINKSMDS 923
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPP-RRRQQGTSGRVTEI--GQAATVGALRQVG 192
DGK S Q R + RF PR + P +RR+Q + E+ G+ + R
Sbjct: 104 DGKESLLQDRRQEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQ 163
Query: 193 RERPHRDDD--PDQGQWQ 240
R+R RD++ + +WQ
Sbjct: 164 RDRQRRDEELWRQRQEWQ 181
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPP-RRRQQGTSGRVTEI--GQAATVGALRQVG 192
DGK S Q R RF PR + P +RR+Q + E+ G+ + R
Sbjct: 104 DGKESLLQDRRTEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQ 163
Query: 193 RERPHRDDD--PDQGQWQ 240
R+R RD++ + +WQ
Sbjct: 164 RDRQRRDEELWRQRQEWQ 181
>CR456762-1|CAG33043.1| 655|Homo sapiens KATNB1 protein.
Length = 655
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPPRRRQ 123
D + S +I++ + E F+P++ RTPPRR +
Sbjct: 368 DERESRAEIQNAEDYNEIFQPKNSISRTPPRRSE 401
>BT007022-1|AAP35668.1| 655|Homo sapiens katanin p80
(WD40-containing) subunit B 1 protein.
Length = 655
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPPRRRQ 123
D + S +I++ + E F+P++ RTPPRR +
Sbjct: 368 DERESRAEIQNAEDYNEIFQPKNSISRTPPRRSE 401
>BC110493-1|AAI10494.1| 680|Homo sapiens KIAA1161 protein protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 334 RRGDEHIVGDVIEMPPVFEPGSSGRDV 254
R + ++GD + + PV EPG RDV
Sbjct: 615 RIDSQFLIGDTLLVAPVLEPGKQERDV 641
>BC070098-1|AAH70098.1| 714|Homo sapiens KIAA1161 protein.
Length = 714
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 334 RRGDEHIVGDVIEMPPVFEPGSSGRDV 254
R + ++GD + + PV EPG RDV
Sbjct: 649 RIDSQFLIGDTLLVAPVLEPGKQERDV 675
>BC001353-1|AAH01353.1| 655|Homo sapiens katanin p80 (WD repeat
containing) subunit B 1 protein.
Length = 655
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPPRRRQ 123
D + S +I++ + E F+P++ RTPPRR +
Sbjct: 368 DERESRAEIQNAEDYNEIFQPKNSISRTPPRRSE 401
>AL356494-2|CAI15965.1| 680|Homo sapiens KIAA1161 protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 334 RRGDEHIVGDVIEMPPVFEPGSSGRDV 254
R + ++GD + + PV EPG RDV
Sbjct: 615 RIDSQFLIGDTLLVAPVLEPGKQERDV 641
>AF052432-1|AAC09328.1| 655|Homo sapiens katanin p80 subunit
protein.
Length = 655
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPPRRRQ 123
D + S +I++ + E F+P++ RTPPRR +
Sbjct: 368 DERESRAEIQNAEDYNEIFQPKNSISRTPPRRSE 401
>AB209250-1|BAD92487.1| 370|Homo sapiens katanin p80 subunit B 1
variant protein.
Length = 370
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 22 DGKNSSYQIRSRTNCLERFRPRSGYVRTPPRRRQ 123
D + S +I++ + E F+P++ RTPPRR +
Sbjct: 131 DERESRAEIQNAEDYNEIFQPKNSISRTPPRRSE 164
>AB032987-1|BAA86475.2| 680|Homo sapiens KIAA1161 protein protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 334 RRGDEHIVGDVIEMPPVFEPGSSGRDV 254
R + ++GD + + PV EPG RDV
Sbjct: 615 RIDSQFLIGDTLLVAPVLEPGKQERDV 641
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,350,156
Number of Sequences: 237096
Number of extensions: 1281679
Number of successful extensions: 3937
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3932
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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