Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A08
(226 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 0.46
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 0.80
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 0.80
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 0.80
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 1.9
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 1.9
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 1.9
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 2.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 3.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 19 7.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 19 7.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 7.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 19 7.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 19 7.5
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 19 7.5
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 19 9.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 19 9.9
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 19 9.9
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 19 9.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 19 9.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.0 bits (47), Expect = 0.46
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +2
Query: 164 QSGIYRGH---YGKENKDTHKCAI 226
Q +Y+ H +GKE +D ++C I
Sbjct: 73 QKNLYQSHLRSHGKEGEDPYRCNI 96
Score = 20.2 bits (40), Expect = 3.2
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 212 VYLCSLCH 189
VY C+LCH
Sbjct: 259 VYKCTLCH 266
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 0.80
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 140 HYYNQ*EQNFHNG*LSSN*Q*LFYVMQEVLVYVHPFEFYYRTMLPR 3
H N + N++N ++N + L+Y + + P YY PR
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPR 136
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 0.80
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 140 HYYNQ*EQNFHNG*LSSN*Q*LFYVMQEVLVYVHPFEFYYRTMLPR 3
H N + N++N ++N + L+Y + + P YY PR
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPR 136
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 0.80
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 140 HYYNQ*EQNFHNG*LSSN*Q*LFYVMQEVLVYVHPFEFYYRTMLPR 3
H N + N++N ++N + L+Y + + P YY PR
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPR 136
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 1.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 159 ICSLVYIEVIMAKRTKI 209
+ SLVY+E+ +A R ++
Sbjct: 211 LMSLVYLEIYLATRRRL 227
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 1.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 159 ICSLVYIEVIMAKRTKI 209
+ SLVY+E+ +A R ++
Sbjct: 211 LMSLVYLEIYLATRRRL 227
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.0 bits (42), Expect = 1.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 159 ICSLVYIEVIMAKRTKI 209
+ SLVY+E+ +A R ++
Sbjct: 211 LMSLVYLEIYLATRRRL 227
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 2.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 65 LHKTITANCLTVTHCGNFVLI 127
L K TA+C V GNF +
Sbjct: 214 LVKNYTADCTQVYSTGNFTCL 234
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.2 bits (40), Expect = 3.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 215 YVYLCSLCHNDLDIYQT 165
+ Y+C C D+YQT
Sbjct: 1068 HFYVCGDCTMAEDVYQT 1084
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.0 bits (37), Expect = 7.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 2 HEATWSYNKIRMGEHKLKPPALHKTITANC 91
H AT S IR+ ++ TITA+C
Sbjct: 109 HIATTSNEFIRIHHSGSITRSIRLTITASC 138
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.0 bits (37), Expect = 7.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 2 HEATWSYNKIRMGEHKLKPPALHKTITANC 91
H AT S IR+ ++ TITA+C
Sbjct: 109 HIATTSNEFIRIHHSGSITRSIRLTITASC 138
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 125 IGYSNGQVH 151
+ YSNGQ H
Sbjct: 370 VHYSNGQTH 378
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 142 SGSQVEYAVWYISRSLWQRE 201
SGS A W R+LW E
Sbjct: 565 SGSINTVAEWEPPRALWPTE 584
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.0 bits (37), Expect = 7.5
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -3
Query: 176 IYQTAYSTCEPD 141
+Y+++ S+C PD
Sbjct: 963 LYKSSESSCNPD 974
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 19.0 bits (37), Expect = 7.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 2 HEATWSYNKIRMGEHKLKPPALHKTITANC 91
H AT S IR+ ++ TITA+C
Sbjct: 48 HIATTSNEFIRIHHSGSITRSIRLTITASC 77
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 78 IVLCNAGGFSLCS 40
I+LC A SLC+
Sbjct: 119 ILLCTASILSLCA 131
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 134 SNGQVHKLNMQSGIYRGHYGKENKDT 211
+ G+ K+N+ YR EN+D+
Sbjct: 546 TTGEPGKINVSEDAYRYLCMPENQDS 571
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 214 MCIFVLFAIMTSI 176
M FVLFAI+ +I
Sbjct: 1 MKFFVLFAILIAI 13
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = -3
Query: 221 HTYVYLCSLCHNDLD 177
HT +YL + H +D
Sbjct: 260 HTIIYLSAKGHRPID 274
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 134 SNGQVHKLNMQSGIYRGHYGKENKDT 211
+ G+ K+N+ YR EN+D+
Sbjct: 546 TTGEPGKINVSEDAYRYLCMPENQDS 571
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,532
Number of Sequences: 438
Number of extensions: 1450
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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