Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A07
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 37 0.010
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 35 0.039
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 35 0.039
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 35 0.039
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 35 0.039
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.068
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 33 0.16
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 33 0.16
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 32 0.27
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.27
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.27
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 32 0.27
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 32 0.27
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 32 0.27
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 32 0.27
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 32 0.27
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.48
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.48
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.48
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 31 0.63
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.63
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 30 0.84
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 30 1.1
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 30 1.1
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.1
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 30 1.1
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 1.5
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 29 1.9
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.6
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 3.4
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 3.4
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 27 5.9
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 5.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 5.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 5.9
U49947-5|AAU05585.1| 111|Caenorhabditis elegans Hypothetical pr... 27 5.9
U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 5.9
AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical ... 27 5.9
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 27 7.8
AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical... 27 7.8
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 27 7.8
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 27 7.8
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 36.7 bits (81), Expect = 0.010
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +1
Query: 139 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 318
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREE---- 208
Query: 319 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL 462
QQ + L E L+ A E + L +KL QN L
Sbjct: 209 --------QQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 248
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 36.7 bits (81), Expect = 0.010
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +1
Query: 139 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 318
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREE---- 208
Query: 319 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTL 462
QQ + L E L+ A E + L +KL QN L
Sbjct: 209 --------QQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 248
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 34.7 bits (76), Expect = 0.039
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Frame = +1
Query: 100 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 279
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 280 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 420
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
Query: 421 ALHEKLQTA 447
++L A
Sbjct: 1214 DQLDQLNKA 1222
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 34.7 bits (76), Expect = 0.039
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Frame = +1
Query: 100 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 279
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 280 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 420
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
Query: 421 ALHEKLQTA 447
++L A
Sbjct: 1214 DQLDQLNKA 1222
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 34.7 bits (76), Expect = 0.039
Identities = 24/114 (21%), Positives = 56/114 (49%)
Frame = +1
Query: 139 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 318
L E Q+ Q ++ + N++ ++ LKE +++ ++S S + ++ DA
Sbjct: 746 LHSAESTNQELQVSLEMLKIEVSNARQKVMESEVLKESFEALQLELSA-SQEVSRSVVDA 804
Query: 319 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 480
+ K+ L + L+ +ED K+ D+++ + ++LQ +QN + ++ L
Sbjct: 805 AVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQSSVEEIKQLQLDLQNFKQNAEVL 858
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 34.7 bits (76), Expect = 0.039
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Frame = +1
Query: 100 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 279
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1100 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1156
Query: 280 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 420
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1157 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1216
Query: 421 ALHEKLQTA 447
++L A
Sbjct: 1217 DQLDQLNKA 1225
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 33.9 bits (74), Expect = 0.068
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +1
Query: 139 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQ---VSELSNSLQGAL 309
L++LE +A+ + + EQ N +K + L K+LK + + V+EL LQ
Sbjct: 111 LKELENNAEALKTQLQEQTNDAKKAK--DELQKSLKSAAARATEATTAVAELQAKLQTVE 168
Query: 310 TDANGK---AKEVLQQARQNLERTVEDLRKAHPDVEK 411
+ + AKE L +QN ER +L+K ++++
Sbjct: 169 KEHKKEIEDAKEALAAEKQNSEREKMELKKLTEELQR 205
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 32.7 bits (71), Expect = 0.16
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Frame = +1
Query: 133 TILQDLEKHAQDFQKTISEQFNAIVNSKNTE-SLNKALKEGSDSMVQQVSELSNSLQGAL 309
T L+D+ +D + + E+ + + +S+N E N L++ + ++V +L+ L +
Sbjct: 268 TTLEDINGKYEDERDRLQEEVDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASE 327
Query: 310 TDANGKAKEVLQQARQNLERTVEDLRKAHPDV---EKQATALHE---KLQTAIQ 453
+ EV ++++ +E VEDL +A + + Q A+ E +L+ AIQ
Sbjct: 328 VAKRSLSSEV-DESKKLMELMVEDLLQAESAINYNQCQKKAIFEDIDRLKDAIQ 380
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 32.7 bits (71), Expect = 0.16
Identities = 30/146 (20%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Frame = +1
Query: 88 VALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAI------VNSKNTESLNKALKE 249
+A + A D N +L + E+ A+ + + ++ +A K ES+N+ L+E
Sbjct: 1331 IANINRARQLEDEKNALLDEKEE-AEGLRAHLEKEIHAARQGAGEARRKAEESVNQQLEE 1389
Query: 250 GSDSMVQQVSELSNSLQGALTDANG--KAKEVLQQARQNLERTVEDLRKAHPDVEKQATA 423
++ V L L+ + ++K+ +QQ ++ +E++R +H D EK+
Sbjct: 1390 LRKKNLRDVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKK 1449
Query: 424 LHEKL---QTAIQNTLKESQNLATEV 492
++ + A+Q L + ++ E+
Sbjct: 1450 FESQMAEERVAVQKALLDRDAMSQEL 1475
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 31.9 bits (69), Expect = 0.27
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 223 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH-- 396
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEHEG 388
Query: 397 --PDVEKQATALHEKLQTAIQNTLKESQNLATEVGVNM 504
++EK+ + EK + AI+ K + T V N+
Sbjct: 389 QMAELEKRLEKVSEKEKEAIEQLEKIQKENKTIVKENV 426
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.27
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Frame = +1
Query: 136 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALK----EGSDSMVQQVSELSNSLQG 303
+++DL+ H+++++K +E + K+ E K L+ + +S ++ EL+ LQ
Sbjct: 756 VVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
Query: 304 A-LTDANGK------AKEV--LQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 456
A T A K +EV LQ + +E+T++ +K+ L EKL AI
Sbjct: 816 AEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIA- 874
Query: 457 TLKESQ 474
LK+++
Sbjct: 875 ALKDAE 880
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.27
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Frame = +1
Query: 136 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALK----EGSDSMVQQVSELSNSLQG 303
+++DL+ H+++++K +E + K+ E K L+ + +S ++ EL+ LQ
Sbjct: 756 VVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
Query: 304 A-LTDANGK------AKEV--LQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 456
A T A K +EV LQ + +E+T++ +K+ L EKL AI
Sbjct: 816 AEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIA- 874
Query: 457 TLKESQ 474
LK+++
Sbjct: 875 ALKDAE 880
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 31.9 bits (69), Expect = 0.27
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 223 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH-- 396
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEHEG 388
Query: 397 --PDVEKQATALHEKLQTAIQNTLKESQNLATEVGVNM 504
++EK+ + EK + AI+ K + T V N+
Sbjct: 389 QMAELEKRLEKVSEKEKEAIEQLEKIQKENKTIVKENV 426
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.27
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Frame = +1
Query: 136 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALK----EGSDSMVQQVSELSNSLQG 303
+++DL+ H+++++K +E + K+ E K L+ + +S ++ EL+ LQ
Sbjct: 756 VVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
Query: 304 A-LTDANGK------AKEV--LQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 456
A T A K +EV LQ + +E+T++ +K+ L EKL AI
Sbjct: 816 AEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIA- 874
Query: 457 TLKESQ 474
LK+++
Sbjct: 875 ALKDAE 880
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 31.9 bits (69), Expect = 0.27
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 145 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 324
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 325 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQ--NTLKES 471
++++ ++ R+ + +TVE D EK A L+EK+ + NTL S
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDSIYSSLNTLAAS 2012
Score = 30.3 bits (65), Expect = 0.84
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +1
Query: 166 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 345
D+++ I Q + I+ T + KA SD + + + + K K +L
Sbjct: 3404 DYRRKIFNQNSEIIFGDLTRDVVKAAFSVSDETLNTLFSQLEQSDWSQIKLSSKQKSILS 3463
Query: 346 Q-----ARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 474
A NL+ + L D E+ +L E+ ++NT K Q
Sbjct: 3464 ANIKSLATSNLDTLIGQLMPREADSEQSEASLSERSSVEMENTFKIQQ 3511
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.9 bits (69), Expect = 0.27
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 145 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 324
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 325 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQ--NTLKES 471
++++ ++ R+ + +TVE D EK A L+EK+ + NTL S
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDSIYSSLNTLAAS 2012
Score = 30.3 bits (65), Expect = 0.84
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +1
Query: 166 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 345
D+++ I Q + I+ T + KA SD + + + + K K +L
Sbjct: 3404 DYRRKIFNQNSEIIFGDLTRDVVKAAFSVSDETLNTLFSQLEQSDWSQIKLSSKQKSILS 3463
Query: 346 Q-----ARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 474
A NL+ + L D E+ +L E+ ++NT K Q
Sbjct: 3464 ANIKSLATSNLDTLIGQLMPREADSEQSEASLSERSSVEMENTFKIQQ 3511
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.27
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Frame = +1
Query: 136 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALK----EGSDSMVQQVSELSNSLQG 303
+++DL+ H+++++K +E + K+ E K L+ + +S ++ EL+ LQ
Sbjct: 756 VVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
Query: 304 A-LTDANGK------AKEV--LQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQN 456
A T A K +EV LQ + +E+T++ +K+ L EKL AI
Sbjct: 816 AEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIA- 874
Query: 457 TLKESQ 474
LK+++
Sbjct: 875 ALKDAE 880
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 0.48
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 297 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 473
TG R+KR + PT SP G+ G P +G P + E+S +RE R P +
Sbjct: 438 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGP-RGPRRSPPTG 494
Query: 474 EPGDGS 491
P GS
Sbjct: 495 SPPTGS 500
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +3
Query: 333 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDGSRRQHG 506
GS PT SP G RGSP R R+A P + P G + G
Sbjct: 414 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 471
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.48
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 297 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 473
TG R+KR + PT SP G+ G P +G P + E+S +RE R P +
Sbjct: 459 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGP-RGPRRSPPTG 515
Query: 474 EPGDGS 491
P GS
Sbjct: 516 SPPTGS 521
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +3
Query: 333 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDGSRRQHG 506
GS PT SP G RGSP R R+A P + P G + G
Sbjct: 435 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 492
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.48
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 297 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 473
TG R+KR + PT SP G+ G P +G P + E+S +RE R P +
Sbjct: 444 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGP-RGPRRSPPTG 500
Query: 474 EPGDGS 491
P GS
Sbjct: 501 SPPTGS 506
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +3
Query: 333 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDGSRRQHG 506
GS PT SP G RGSP R R+A P + P G + G
Sbjct: 420 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 477
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.63
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 160 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 333
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 334 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQN 477
E A + + ED +++ + +QA EK A+ + K +
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDD 211
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 30.7 bits (66), Expect = 0.63
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 160 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 333
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 334 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQN 477
E A + + ED +++ + +QA EK A+ + K +
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDD 211
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.63
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 160 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 333
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 334 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQN 477
E A + + ED +++ + +QA EK A+ + K +
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDD 211
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 30.7 bits (66), Expect = 0.63
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 160 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 333
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 334 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQN 477
E A + + ED +++ + +QA EK A+ + K +
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDD 211
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 30.7 bits (66), Expect = 0.63
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +1
Query: 151 EKHAQDFQKT-ISEQFNAI--VNSKNTESLNKALKEGSDSM--VQQVSELSNSLQGALTD 315
E A + +K+ + EQ + + V++ E + K K M + + +E + L
Sbjct: 304 ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 363
Query: 316 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAT 486
AKE L+ + ++ + A D EK+ L E+L+ A Q+ L+ SQ LA+
Sbjct: 364 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERA-QSALESSQELAS 419
Score = 30.3 bits (65), Expect = 0.84
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +1
Query: 214 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 393
KN + + A KE + +Q++ + L+ + K LQQA Q+ + LR
Sbjct: 636 KNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA- 694
Query: 394 HPDVEKQATALHEKLQTAIQNTLKESQNL 480
++EK L E + +QN+ K Q +
Sbjct: 695 --EIEKLEAKLQEIEKAKMQNSSKREQKV 721
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 30.7 bits (66), Expect = 0.63
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +1
Query: 151 EKHAQDFQKT-ISEQFNAI--VNSKNTESLNKALKEGSDSM--VQQVSELSNSLQGALTD 315
E A + +K+ + EQ + + V++ E + K K M + + +E + L
Sbjct: 304 ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 363
Query: 316 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAT 486
AKE L+ + ++ + A D EK+ L E+L+ A Q+ L+ SQ LA+
Sbjct: 364 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERA-QSALESSQELAS 419
Score = 30.3 bits (65), Expect = 0.84
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +1
Query: 214 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 393
KN + + A KE + +Q++ + L+ + K LQQA Q+ + LR
Sbjct: 636 KNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA- 694
Query: 394 HPDVEKQATALHEKLQTAIQNTLKESQNL 480
++EK L E + +QN+ K Q +
Sbjct: 695 --EIEKLEAKLQEIEKAKMQNSSKREQKV 721
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 30.3 bits (65), Expect = 0.84
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Frame = +1
Query: 73 VLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEG 252
+L +A + + +R+ L + HA + +K ++E + +A E
Sbjct: 262 MLEKALANSQERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQWEM 321
Query: 253 SDSMVQQVSELSNSLQGAL--TDANGKAKEVLQQAR---------QNLERTVEDLRKAHP 399
+ ++ SL G+L T G +++++ + Q LER V DLRK H
Sbjct: 322 EKTQLRMQLNKDTSLTGSLKRTTTPGSTEDLIRMRKSIQSKDDKIQQLERMVNDLRKTHG 381
Query: 400 DVEKQ 414
D +Q
Sbjct: 382 DKTEQ 386
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 339 APTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDGSRR 497
+P+ S R SP APRRR++ R R P + P RR
Sbjct: 469 SPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRR 521
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Frame = +1
Query: 214 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 363
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 801 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 859
Query: 364 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAT 486
ER + + + D+E++ + + + +Q A++ E ++L T
Sbjct: 860 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKT 899
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Frame = +1
Query: 214 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 363
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 803 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 364 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAT 486
ER + + + D+E++ + + + +Q A++ E ++L T
Sbjct: 862 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKT 901
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 29.9 bits (64), Expect = 1.1
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 183
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 402 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 458
Query: 184 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 363
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 459 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 518
Query: 364 ERTVEDLRKAHPDVE----KQATALHEKLQTAIQ 453
++ E + A D E KQ ++ K TA Q
Sbjct: 519 KKCAEAEKNAEKDREKESLKQTLSIARKKMTAYQ 552
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 29.9 bits (64), Expect = 1.1
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 183
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 388 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 444
Query: 184 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 363
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 445 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 504
Query: 364 ERTVEDLRKAHPDVE----KQATALHEKLQTAIQ 453
++ E + A D E KQ ++ K TA Q
Sbjct: 505 KKCAEAEKNAEKDREKESLKQTLSIARKKMTAYQ 538
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 29.9 bits (64), Expect = 1.1
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 183
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 388 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 444
Query: 184 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 363
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 445 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 504
Query: 364 ERTVEDLRKAHPDVE----KQATALHEKLQTAIQ 453
++ E + A D E KQ ++ K TA Q
Sbjct: 505 KKCAEAEKNAEKDREKESLKQTLSIARKKMTAYQ 538
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Frame = +1
Query: 214 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 363
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 803 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 364 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAT 486
ER + + + D+E++ + + + +Q A++ E ++L T
Sbjct: 862 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKT 901
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 322 GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL 438
GKA + L+ + N++ + E +R+ D+ K+ T +H K+
Sbjct: 359 GKALQTLKTVQTNVQDSNESIRRGENDMLKEITDVHSKV 397
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = +1
Query: 184 SEQFNAIVNSKNTESLNKALKEGSDSMVQQV--SELSNSLQGALTDANGKAKEVLQQARQ 357
+++F IV +K + K +E + E+ N+ + ++ K KE L Q
Sbjct: 1006 NDKFGNIVQAKQEMGMTKEQQEDAKRAFLAAIRKEIPNASEVPQSELKAKIKE-LHQRIC 1064
Query: 358 NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLATEVG 495
LE DL K H E L+E+ + +N+ + EVG
Sbjct: 1065 KLETEKYDLEKRHERQEYDMKELNERQRQVTRNSALKKGIDPAEVG 1110
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 29.1 bits (62), Expect = 1.9
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Frame = +1
Query: 130 NTILQDLEKHAQDFQKTISEQFNAI--VNSKNTESLNKALK-EGSDSMVQQVSELSNSLQ 300
N +D+E + Q I E + + K E L++ + ++ +Q E +
Sbjct: 95 NRFQRDVEMSRMEAQNKIEEMSVEVDAAHKKVNEVLSEVEQLRATNFDLQMHIETAKRTM 154
Query: 301 GALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE---KQATALHEKLQTAIQNTLKES 471
L D N + ++ + + + E EDL+++ DVE +Q AL +L ++ E+
Sbjct: 155 EELADCNEELEKRVDEYEEAAEEKDEDLKQSTWDVETLTRQNEALRVELD-GVRQGFHET 213
Query: 472 QNLATEV 492
+ LA EV
Sbjct: 214 RELADEV 220
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 331 KEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLATEVGVNMD 507
+++L +R+ + +D K H +K A L ++LQ A + LKE + EV + +
Sbjct: 195 EKMLSPSRRRGHKDDDDFGKRHEMKQKHAEELRQQLQEAKASKLKELTSRVEEVRMKQE 253
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 136 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT- 312
+L + E+ A Q+T SE+ N + +++ + N LKE + + + S Q ALT
Sbjct: 68 MLDEAEEKASSAQETTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTR 127
Query: 313 --DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKE 468
D N K ++ + + L + ++EK T +E+ ++ I+ +E
Sbjct: 128 ISDENTKLQKDCHELESIRQCAQFALDNCNEELEKTQTE-NEEHESRIETLERE 180
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +1
Query: 130 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTES------LNKALKEGSDSMVQQVSELSN 291
N ++ +K ++F+K + N+I+ ++ S N ++ D+ +Q+++E
Sbjct: 67 NRKAENYQKKWKNFEKESILKLNSIMEKISSHSQPSHHHTNASITLPYDATIQKIAEKEK 126
Query: 292 SLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 441
+L L + + L++ + + E+T L K +EK L E+ Q
Sbjct: 127 NLSKLLKELS-IVDSSLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQ 175
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 254 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 340
PT WC+ S S+P ++R R P +T +C
Sbjct: 78 PTDWCAISGSFPIMFR-RYPEETTADAQC 105
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 254 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 340
PT WC+ S S+P ++R R P +T +C
Sbjct: 93 PTDWCAISGSFPIMFR-RYPEETTADAQC 120
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 342 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 455
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 342 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 455
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 208 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 387
++ N NKAL + + Q++ E+SN ++ A + R+ V+++
Sbjct: 105 SNSNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEIT 164
Query: 388 K 390
K
Sbjct: 165 K 165
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/95 (22%), Positives = 46/95 (48%)
Frame = +1
Query: 196 NAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTV 375
+A+V + E +K +E + V + ++ + + +GKA+E + ++E
Sbjct: 481 DAVVKGEVVEK-DKKSEEAREIEAIDVDDGDADVKQEVVEKDGKAEEAPEHEAMDVEDDD 539
Query: 376 EDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 480
EDL + P +E + E L T++ + KE+ ++
Sbjct: 540 EDLDETIP-LESDEQMMDENLDTSVASK-KEAMDV 572
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 121 DAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGS--DSMVQQVSELSNS 294
+AP D+E +D +TI + + + +N ++ + KE D + ++++ N+
Sbjct: 526 EAPEHEAMDVEDDDEDLDETIPLESDEQMMDENLDTSVASKKEAMDVDELSNKMTDAVNN 585
Query: 295 LQGALTDANGK 327
LQ ++T++ +
Sbjct: 586 LQKSITESTNE 596
>Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical
protein F48F7.2 protein.
Length = 299
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 304 ALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 474
ALT A+ + K +L+ + R DLRK E +++Q+ + ++++Q
Sbjct: 63 ALTIADPRDKNILENQIGTIRRRTGDLRKLVRQAEDDFLEFTKQVQSVTEKRMRQNQ 119
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.5 bits (58), Expect = 5.9
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 181 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK-EVLQQ 348
I+ N + N + + + KALKE + Q+S+L+ LQG L + + + K E LQQ
Sbjct: 250 IASMKNCLKNEE-IQKMQKALKEKDE----QISKLTEQLQGLLINRDKETKVEDLQQ 301
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +1
Query: 145 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 324
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1099 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1156
Query: 325 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 414
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1157 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1185
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +1
Query: 145 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 324
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 325 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 414
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +1
Query: 145 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 324
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 325 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 414
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U49947-5|AAU05585.1| 111|Caenorhabditis elegans Hypothetical
protein C30G4.4a protein.
Length = 111
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 342 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDG 488
P SP G H+ P A ++ E +R +R ++ HP + +P G
Sbjct: 34 PYFSPN-GKHAIAKPTAAIKKEEIVNRSSRSLSDIHPSSSPSVVQPTSG 81
>U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical
protein C30G4.4b protein.
Length = 192
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 342 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDG 488
P SP G H+ P A ++ E +R +R ++ HP + +P G
Sbjct: 60 PYFSPN-GKHAIAKPTAAIKKEEIVNRSSRSLSDIHPSSSPSVVQPTSG 107
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 363 GAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEP 479
G H +G PQ P H +R PEH G P P
Sbjct: 126 GHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRP 164
>AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical
protein B0454.5 protein.
Length = 198
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 488 SVARFWLSFSVFWMAVCSFSC 426
++A F+L FS+FW+ + F C
Sbjct: 171 NIATFFLFFSIFWLFMSVFCC 191
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 309 DRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGDG 488
D RKR S + TSS G S + RRR + RE +R G +
Sbjct: 247 DTRKRRSSSYSSTSSSSDGRSRSRSSSRSDRRRRDDRKRPREDRDRKDYRRDGRRDGRRD 306
Query: 489 SRRQH 503
R++H
Sbjct: 307 DRKRH 311
>AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical
protein Y39A1A.23 protein.
Length = 497
Score = 27.1 bits (57), Expect = 7.8
Identities = 24/123 (19%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +1
Query: 121 DAPNTILQD-LEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 297
D IL++ + +H ++ K+ + ++ SK ++ + ++ S + +S+ +
Sbjct: 282 DLDGGILKETMAQHEEEEDKSTAHSSSSRRKSKAIDTSSSGTQK-SKKCSESLSQEETTR 340
Query: 298 QGALTDANGKAKE--VLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKES 471
+L N E V +Q+ ++ E TV + R+ PD++ + Q + T+KE
Sbjct: 341 SQSLPSRNRFVPEIPVAEQSWRDREVTVYEQREPSPDLQIVEEVMEIDNQPIVTRTIKEE 400
Query: 472 QNL 480
++
Sbjct: 401 HSV 403
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 27.1 bits (57), Expect = 7.8
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Frame = +1
Query: 148 LEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGK 327
L+ D QKT E + NS+ S K + DS + ++ + N+L+ + D NG+
Sbjct: 89 LDDERFDHQKTRRE----LANSRLEISDLKGEAKCHDSELNRLYTIINNLEKKVEDLNGE 144
Query: 328 AKEVLQQARQNL-------ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAT 486
++ L++ ++ L E E + +V K E I+ +E + T
Sbjct: 145 HQKSLEKLKERLHEKDAFIEACEEFYDEKKINVNKMTLMKQEMELKRIKKNFEEYKERMT 204
Query: 487 EVGVNMD 507
EV N++
Sbjct: 205 EVEKNLN 211
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 27.1 bits (57), Expect = 7.8
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +1
Query: 178 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN-----GKAKEVL 342
T SE+ N K T+S N+ + S+ Q E + + D + G+ ++L
Sbjct: 170 TESEKKLKETNGKVTKSRNQLSERVSELEAQLKREADTAQKPKQADPDLLNKVGRLNDLL 229
Query: 343 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLATEV 492
+QN E++ K ++E + +KL + +KE E+
Sbjct: 230 TSEKQNTRVLQEEVAKFKAELESTNKTMKQKLVHERKTLIKEKLEQGKEI 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.122 0.319
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,772,981
Number of Sequences: 27780
Number of extensions: 216874
Number of successful extensions: 879
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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