Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A04
(248 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 27 0.36
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 25 1.5
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 1.9
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 1.9
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 1.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 1.9
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 25 1.9
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 24 2.6
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 24 3.4
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 24 3.4
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 23 5.9
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 23 5.9
SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces pom... 23 5.9
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 23 5.9
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 23 7.8
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.1 bits (57), Expect = 0.36
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 225 MMMINHQSRQELSVPSELVIT*QEVRKKHIQLAIRWHQEKQP 100
M N +Q L V + + E+RK + QL +WH +K P
Sbjct: 1 MFTNNFSQKQILGVSKDA--SESEIRKAYRQLTKQWHPDKNP 40
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 25.0 bits (52), Expect = 1.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 6 RVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL 125
R +N F V+G+D K + +VD + LG L
Sbjct: 260 RAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKL 299
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 24.6 bits (51), Expect = 1.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 133 LDVLFSYLLLCYHQLGWNT*LLSTLVVY 216
L V +SYL+ CYH++ + ++T Y
Sbjct: 463 LAVCYSYLVDCYHEMAASALSVATFTRY 490
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 144 FFVPLVMLSPARMEHLALVYFGGLSSSFL 230
FF+ L++L M L L+ G LSS F+
Sbjct: 581 FFIDLIVLQGIGMFPLKLIQLGKLSSYFV 609
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 24.6 bits (51), Expect = 1.9
Identities = 6/19 (31%), Positives = 16/19 (84%)
Frame = -3
Query: 156 EVRKKHIQLAIRWHQEKQP 100
E+R+++++L +R+H ++ P
Sbjct: 27 EIRQQYLKLVLRYHPDRNP 45
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 24.6 bits (51), Expect = 1.9
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+SSILN + SS L S P+T S V T+
Sbjct: 757 TSSSILNSSTPITSSSVLNSSTPITSSTVVNTS 789
Score = 24.6 bits (51), Expect = 1.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+SS+LN + SS L S P+T S V T+
Sbjct: 1993 TSSSVLNTSTPITSSSVLNSSTPITSSTVVNTS 2025
Score = 24.2 bits (50), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+SS+LN + SS L S P+T S V T+
Sbjct: 457 TSSSVLNSSTPITSSSVLNSSTPITSSTVVNTS 489
Score = 24.2 bits (50), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+SS+LN + SS L S P+T S V T+
Sbjct: 1537 TSSSVLNSSTPITSSSVLNSSTPITSSTVVNTS 1569
Score = 24.2 bits (50), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+SS+LN + SS L S P+T S V T+
Sbjct: 3229 TSSSVLNSSTPITSSSVLNSSTPITSSTVVNTS 3261
Score = 23.8 bits (49), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 151 TKKAHPASYKMAPRETTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+ P + + T+SS+LN + SS L S P+T S
Sbjct: 370 TQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSS 411
Score = 23.8 bits (49), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYV 17
T+SSILN + SS L S P+T S V
Sbjct: 3349 TSSSILNSSTPVTSSSVLNSSTPITSSTVV 3378
Score = 23.4 bits (48), Expect = 4.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYV 17
T+SSILN + SS L S P+T S V
Sbjct: 1237 TSSSILNSSTPITSSSVLNSSTPITSSTVV 1266
Score = 23.4 bits (48), Expect = 4.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYV 17
T+SSILN + SS L S P+T S V
Sbjct: 3121 TSSSILNSSTPITSSSILNSSTPITSSTVV 3150
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+SSILN + SS L S P+T S
Sbjct: 397 TSSSILNTSTPITSSSVLNSSTPITSS 423
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+S++LN + SS L S P+T S V T+
Sbjct: 805 TSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 837
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+S++LN + SS L S P+T S V T+
Sbjct: 1093 TSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1125
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+S++LN + SS L S P+T S V T+
Sbjct: 1393 TSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYV 17
T+SS+LN + SS L S P+T S V
Sbjct: 1921 TSSSVLNSSTPITSSSVLNSSTPITSSTVV 1950
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYV 17
T+SS+LN + SS L S P+T S V
Sbjct: 2113 TSSSVLNSSTPITSSSVLNSSTPITSSTVV 2142
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+S++LN + SS L S P+T S V T+
Sbjct: 2233 TSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYV 17
T+SS+LN + SS L S P+T S V
Sbjct: 2425 TSSSVLNSSTPITSSSVLNSSTPITSSTVV 2454
Score = 23.0 bits (47), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+S++LN + SS L S P+T S V T+
Sbjct: 2521 TSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
Score = 22.6 bits (46), Expect = 7.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKSKYVLTT 8
T+SS+LN + SS L S P+T S + T+
Sbjct: 637 TSSSVLNSSTPITSSSVLNSSTPITSSTALNTS 669
Score = 22.6 bits (46), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+SS+LN + SS L S P+T S
Sbjct: 985 TSSSVLNSSTPITSSSVLNTSTPITSS 1011
Score = 22.6 bits (46), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+SS+LN + SS L S P+T S
Sbjct: 1981 TSSSVLNSSTPITSSSVLNTSTPITSS 2007
Score = 22.6 bits (46), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+SS+LN + SS L S P+T S
Sbjct: 3109 TSSSVLNSSTAITSSSILNSSTPITSS 3135
Score = 22.6 bits (46), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+SS+LN + SS L S P+T S
Sbjct: 3217 TSSSVLNSSTAITSSSVLNSSTPITSS 3243
Score = 22.6 bits (46), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 106 TTSSILNIWSTKVLSSDLRLSIPLTKS 26
T+SS+LN + SS L S P+T S
Sbjct: 3445 TSSSVLNSSTAIASSSILNSSTPITSS 3471
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 24.6 bits (51), Expect = 1.9
Identities = 7/34 (20%), Positives = 21/34 (61%)
Frame = -3
Query: 156 EVRKKHIQLAIRWHQEKQPHQYSIYGRLKFCHQI 55
E++K + +LA+++H +K P+ + + +++
Sbjct: 21 ELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEV 54
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 24.2 bits (50), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 241 PPVYRNDDDKPPK*TRAKCSIRAGDNITRGTKKAHPASYK 122
P +YR + +K S+RAG I+ KK HP +K
Sbjct: 247 PVLYRGNSEKSCH--SCGGSLRAGRIISASGKKLHPQCFK 284
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 23.8 bits (49), Expect = 3.4
Identities = 8/34 (23%), Positives = 21/34 (61%)
Frame = -3
Query: 156 EVRKKHIQLAIRWHQEKQPHQYSIYGRLKFCHQI 55
E++K + +LA+++H +K P+ + + ++I
Sbjct: 21 ELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEI 54
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 23.8 bits (49), Expect = 3.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 101 GCFSWCHLIASWMCFFRTSCYVITS 175
G S C+L++SW+ +T Y + +
Sbjct: 307 GTVSLCNLVSSWILNTKTHSYALVT 331
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 23.0 bits (47), Expect = 5.9
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = -3
Query: 156 EVRKKHIQLAIRWHQEKQP 100
+++K + +LA+++H +K P
Sbjct: 23 DIKKAYRKLAVKYHPDKNP 41
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 23.0 bits (47), Expect = 5.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 160 LCYHQLGWNT*LLSTLVVYHHHF 228
+ ++ GW LST +++HH F
Sbjct: 446 MVFYTHGWTKSSLSTGLLHHHRF 468
>SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 416
Score = 23.0 bits (47), Expect = 5.9
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 12 VNTYFDFVK--GIDNRKSDDRTLVDHILSIDEV 104
VN Y DF++ G D DD DHIL I +V
Sbjct: 266 VNFYQDFIRKPGSDRATIDDAA--DHILHIIKV 296
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 141 HIQLAIRWHQEKQPHQYSIYGRLKFCHQI 55
H+Q +R + E ++SI+G +KFC ++
Sbjct: 607 HLQ-ELRDYLEYPNLEFSIWGNVKFCIEV 634
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 22.6 bits (46), Expect = 7.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 194 SCLLWWFIIIISVHWWYW 247
S L ++FI+ ++ WYW
Sbjct: 269 SRLRYFFIVFVASFIWYW 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,091,978
Number of Sequences: 5004
Number of extensions: 19192
Number of successful extensions: 152
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 45369236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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