Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A04
(248 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222808-1|BAD96528.1| 338|Homo sapiens transitional epithelia ... 109 2e-24
BT006832-1|AAP35478.1| 338|Homo sapiens transitional epithelia ... 108 3e-24
BC004468-1|AAH04468.1| 338|Homo sapiens UbiA prenyltransferase ... 108 3e-24
AL031291-1|CAI22837.1| 338|Homo sapiens transitional epithelia ... 108 3e-24
AF117064-1|AAD27581.1| 338|Homo sapiens transitional epithelia ... 108 3e-24
AL031291-2|CAI22838.1| 179|Homo sapiens transitional epithelia ... 102 2e-22
BC050288-1|AAH50288.1| 232|Homo sapiens DnaJ (Hsp40) homolog, s... 30 1.2
BC029521-1|AAH29521.1| 232|Homo sapiens DnaJ (Hsp40) homolog, s... 30 1.2
BC030128-1|AAH30128.1| 280|Homo sapiens inhibitor of growth fam... 28 4.8
AJ006851-1|CAC20567.1| 280|Homo sapiens p32 protein protein. 28 4.8
AF062748-1|AAG11396.1| 280|Homo sapiens p33 protein. 28 4.8
AF053537-1|AAG11395.1| 280|Homo sapiens p33 protein. 28 4.8
AB012853-1|BAA36419.1| 280|Homo sapiens ING1Lp protein. 28 4.8
>AK222808-1|BAD96528.1| 338|Homo sapiens transitional epithelia
response protein variant protein.
Length = 338
Score = 109 bits (261), Expect = 2e-24
Identities = 52/80 (65%), Positives = 59/80 (73%)
Frame = +3
Query: 9 VVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL*LAGCAFFVPLVMLSPARMEH 188
+VNTY+DF KGID++KSDDRTLVD IL +VV G L GC L LSP ++EH
Sbjct: 100 LVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEH 159
Query: 189 LALVYFGGLSSSFLYTGGIG 248
LALVYFGGLS SFLYTGGIG
Sbjct: 160 LALVYFGGLSGSFLYTGGIG 179
>BT006832-1|AAP35478.1| 338|Homo sapiens transitional epithelia
response protein protein.
Length = 338
Score = 108 bits (260), Expect = 3e-24
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +3
Query: 9 VVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL*LAGCAFFVPLVMLSPARMEH 188
+VNTY+DF KGID++KSDDRTLVD IL +VV G L GC L LSP ++EH
Sbjct: 100 LVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEH 159
Query: 189 LALVYFGGLSSSFLYTGGIG 248
LAL+YFGGLS SFLYTGGIG
Sbjct: 160 LALIYFGGLSGSFLYTGGIG 179
>BC004468-1|AAH04468.1| 338|Homo sapiens UbiA prenyltransferase
domain containing 1 protein.
Length = 338
Score = 108 bits (260), Expect = 3e-24
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +3
Query: 9 VVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL*LAGCAFFVPLVMLSPARMEH 188
+VNTY+DF KGID++KSDDRTLVD IL +VV G L GC L LSP ++EH
Sbjct: 100 LVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEH 159
Query: 189 LALVYFGGLSSSFLYTGGIG 248
LAL+YFGGLS SFLYTGGIG
Sbjct: 160 LALIYFGGLSGSFLYTGGIG 179
>AL031291-1|CAI22837.1| 338|Homo sapiens transitional epithelia
response protein (TERE1) protein.
Length = 338
Score = 108 bits (260), Expect = 3e-24
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +3
Query: 9 VVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL*LAGCAFFVPLVMLSPARMEH 188
+VNTY+DF KGID++KSDDRTLVD IL +VV G L GC L LSP ++EH
Sbjct: 100 LVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEH 159
Query: 189 LALVYFGGLSSSFLYTGGIG 248
LAL+YFGGLS SFLYTGGIG
Sbjct: 160 LALIYFGGLSGSFLYTGGIG 179
>AF117064-1|AAD27581.1| 338|Homo sapiens transitional epithelia
response protein protein.
Length = 338
Score = 108 bits (260), Expect = 3e-24
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +3
Query: 9 VVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL*LAGCAFFVPLVMLSPARMEH 188
+VNTY+DF KGID++KSDDRTLVD IL +VV G L GC L LSP ++EH
Sbjct: 100 LVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEH 159
Query: 189 LALVYFGGLSSSFLYTGGIG 248
LAL+YFGGLS SFLYTGGIG
Sbjct: 160 LALIYFGGLSGSFLYTGGIG 179
>AL031291-2|CAI22838.1| 179|Homo sapiens transitional epithelia
response protein (TERE1) protein.
Length = 179
Score = 102 bits (244), Expect = 2e-22
Identities = 48/77 (62%), Positives = 56/77 (72%)
Frame = +3
Query: 9 VVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVVSLGAIL*LAGCAFFVPLVMLSPARMEH 188
+VNTY+DF KGID++KSDDRTLVD IL +VV G L GC L LSP ++EH
Sbjct: 100 LVNTYYDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEH 159
Query: 189 LALVYFGGLSSSFLYTG 239
LAL+YFGGLS SFLYTG
Sbjct: 160 LALIYFGGLSGSFLYTG 176
>BC050288-1|AAH50288.1| 232|Homo sapiens DnaJ (Hsp40) homolog,
subfamily B, member 8 protein.
Length = 232
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 159 QEVRKKHIQLAIRWHQEKQP-HQYSIYGRLKFCHQIYDYLFL*RSRNMC*QPSC 1
++++K + +LA+RWH +K P ++ + K + Y+ L + R++ + C
Sbjct: 17 EDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 70
>BC029521-1|AAH29521.1| 232|Homo sapiens DnaJ (Hsp40) homolog,
subfamily B, member 8 protein.
Length = 232
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 159 QEVRKKHIQLAIRWHQEKQP-HQYSIYGRLKFCHQIYDYLFL*RSRNMC*QPSC 1
++++K + +LA+RWH +K P ++ + K + Y+ L + R++ + C
Sbjct: 17 EDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 70
>BC030128-1|AAH30128.1| 280|Homo sapiens inhibitor of growth
family, member 2 protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 220 DDKPPK*TRAKCSIRAGDNITRGTKKAHPASYKMAPRETTSSILN 86
DD+PPK ++K + + + + ++A P + + P E T + N
Sbjct: 174 DDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCN 218
>AJ006851-1|CAC20567.1| 280|Homo sapiens p32 protein protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 220 DDKPPK*TRAKCSIRAGDNITRGTKKAHPASYKMAPRETTSSILN 86
DD+PPK ++K + + + + ++A P + + P E T + N
Sbjct: 174 DDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCN 218
>AF062748-1|AAG11396.1| 280|Homo sapiens p33 protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 220 DDKPPK*TRAKCSIRAGDNITRGTKKAHPASYKMAPRETTSSILN 86
DD+PPK ++K + + + + ++A P + + P E T + N
Sbjct: 174 DDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCN 218
>AF053537-1|AAG11395.1| 280|Homo sapiens p33 protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 220 DDKPPK*TRAKCSIRAGDNITRGTKKAHPASYKMAPRETTSSILN 86
DD+PPK ++K + + + + ++A P + + P E T + N
Sbjct: 174 DDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCN 218
>AB012853-1|BAA36419.1| 280|Homo sapiens ING1Lp protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 220 DDKPPK*TRAKCSIRAGDNITRGTKKAHPASYKMAPRETTSSILN 86
DD+PPK ++K + + + + ++A P + + P E T + N
Sbjct: 174 DDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCN 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,703,513
Number of Sequences: 237096
Number of extensions: 699398
Number of successful extensions: 1277
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -