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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_A03
         (300 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624...   155   5e-39
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407...   146   3e-36
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408...   133   2e-32
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600...    31   0.13 
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323...    31   0.22 
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    29   0.89 
06_03_0175 + 17553447-17553667,17555313-17555467,17555625-175557...    28   1.2  
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756...    27   2.7  
02_03_0106 + 15292869-15296138                                         27   2.7  
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089...    27   3.6  
11_06_0643 - 25773250-25773843                                         27   3.6  
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688...    26   4.7  
05_01_0592 + 5332067-5332233,5332326-5332488,5332572-5332642,533...    26   4.7  
04_04_0295 - 24212526-24212684,24213066-24213218,24213497-242136...    26   4.7  
01_05_0511 - 22831889-22832523,22833743-22833835,22834018-228342...    26   4.7  
10_08_0972 + 21958658-21958825,21959006-21959197,21959645-219598...    26   6.3  
09_02_0492 - 9866492-9866848                                           26   6.3  
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371     26   6.3  
06_02_0263 - 13566621-13569875                                         26   6.3  
05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517           26   6.3  
11_06_0757 + 26964983-26965048,26965470-26965874,26966921-269678...    25   8.3  
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975...    25   8.3  
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846...    25   8.3  
07_03_0572 - 19604643-19604745,19604947-19605629,19605786-196062...    25   8.3  
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351...    25   8.3  
06_01_1064 - 8609162-8610583                                           25   8.3  
06_01_1060 + 8522131-8523606                                           25   8.3  
06_01_0837 - 6355315-6355342,6356185-6356361,6356579-6356662,635...    25   8.3  
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221...    25   8.3  
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850...    25   8.3  
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844...    25   8.3  

>11_01_0740 +
           6243517-6243526,6244822-6245323,6245415-6245496,
           6245741-6245821
          Length = 224

 Score =  155 bits (377), Expect = 5e-39
 Identities = 67/91 (73%), Positives = 78/91 (85%)
 Frame = +1

Query: 28  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHL 207
           MGRRPARCYR  KNKPYPKSR+CRGVPDPKIRI+D+G K+  VD+FP CVHLVS E E++
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60

Query: 208 SSEALEAGRICCNKYLVKNCGKDQFHIRMRL 300
           SSEALEA RI CNKY+ KN GKD FH+R+R+
Sbjct: 61  SSEALEAARIACNKYMTKNAGKDAFHLRVRV 91


>03_02_0897 -
           12239375-12239458,12240035-12240116,12240213-12240714,
           12241150-12241303,12241458-12241629,12242237-12242443,
           12242926-12243323
          Length = 532

 Score =  146 bits (354), Expect = 3e-36
 Identities = 62/85 (72%), Positives = 73/85 (85%)
 Frame = +1

Query: 40  PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEA 219
           P RCYR  KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E++SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371

Query: 220 LEAGRICCNKYLVKNCGKDQFHIRM 294
           LEA RI CNKY+ K+ GKD FH+R+
Sbjct: 372 LEAARIACNKYMAKHAGKDAFHLRV 396


>05_01_0490 +
           4083768-4083775,4083845-4084336,4084441-4084522,
           4086671-4087357,4087555-4087813,4088435-4088558,
           4089474-4089564
          Length = 580

 Score =  133 bits (322), Expect = 2e-32
 Identities = 57/84 (67%), Positives = 70/84 (83%)
 Frame = +1

Query: 49  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALEA 228
           CYR  KNKPYPKSR+CRGVPDPKIRI+D+G K+  VD+F  CVHLVS E E+++SEALEA
Sbjct: 4   CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63

Query: 229 GRICCNKYLVKNCGKDQFHIRMRL 300
            RI CNKY+ K+ GKD FH+R+R+
Sbjct: 64  ARIACNKYMTKSAGKDAFHLRVRV 87


>10_08_0141 +
           15159160-15159306,15159708-15159815,15159958-15160006,
           15160067-15160182,15160358-15160399,15161026-15161442,
           15162356-15162509,15162911-15162975,15163793-15163870,
           15163951-15164061,15164227-15164271,15164677-15164850,
           15165383-15166335,15166471-15166681,15167037-15167196,
           15168786-15169174
          Length = 1072

 Score = 31.5 bits (68), Expect = 0.13
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 151 TVDDFPLC-VHLVSDEYEHLSSEALEAGRICCNKYLVKNCG 270
           T D  P C +HL SD Y + S E ++AG+  C   L K  G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627


>06_03_0243 +
           18629793-18630047,18630362-18630442,18631911-18632305,
           18632471-18632926,18633156-18633247,18633528-18633683,
           18635657-18636057
          Length = 611

 Score = 30.7 bits (66), Expect = 0.22
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 256 RGTCCNRYGLLPAPQNSNARTHQTLSARIVGSHPLS 149
           R  CC   GL P P  S+ R+  +L A    S P+S
Sbjct: 179 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPVS 214


>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
            693391-693518,693951-694010,694113-694163,694704-694821,
            694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 28.7 bits (61), Expect = 0.89
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -2

Query: 233  RPASSASELKCSYSSDTKCTHSGKSSTVALFLPKSKIRIFGSGTPRQNR 87
            R ASS  E  C  S+   CTH    S++A     +K + F   TP ++R
Sbjct: 1016 RTASSQHEGSCLSSTTNLCTHDELHSSIA----SAKAKSFAPATPVEDR 1060



 Score = 25.8 bits (54), Expect = 6.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 239  QIRPASSAS--ELKCSYSSDTKCTHSGKSSTVALFLPKS 129
            +I P SS    ++KC YSS T    S + S  +  LP+S
Sbjct: 1285 KILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPES 1323


>06_03_0175 +
           17553447-17553667,17555313-17555467,17555625-17555713,
           17556253-17556376,17556920-17556989,17557345-17557441,
           17559365-17559427,17559504-17559581,17559675-17559737
          Length = 319

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 70  YSYNIDNISLVGAPLCSPQSD 8
           Y Y  D I L+G PLC P SD
Sbjct: 168 YLYPYDEIVLLGIPLCVPWSD 188


>07_03_0770 -
           21375099-21375122,21375321-21375448,21375541-21375672,
           21377016-21377874
          Length = 380

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 292 SGCGTDLYRSSLRGTCCNR 236
           +GCGT++ R ++ G  CNR
Sbjct: 97  AGCGTNVSRDAVAGPTCNR 115


>02_03_0106 + 15292869-15296138
          Length = 1089

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 296  LIRMWN*SLPQFFTRYLLQQIRPASSASELKCSYSSDTKCTHSGKSSTVALFLPKSKI 123
            LI  W+ + P++    LL + R      EL+CS S    C   GK+ ++   +P+ +I
Sbjct: 1008 LIIFWSIAFPRWLE--LLIRKRDGLCHFELQCSLSLLRSCLDGGKNWSIVQQIPEVRI 1063


>12_02_0957 +
           24807261-24807311,24807436-24807773,24808727-24808927,
           24809024-24809069,24809284-24809600,24809949-24810072,
           24810465-24810537,24810968-24811173,24811384-24811651,
           24811780-24811877,24812116-24812379
          Length = 661

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 257 TRYLLQQIRPASSASELKCSYSSDTKCTHSGKSS 156
           +R+ ++   P+    EL C   ++T C H G  S
Sbjct: 85  SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118


>11_06_0643 - 25773250-25773843
          Length = 197

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 292 SGCGTDLYRSSLRGTCCNRYG 230
           S   TD++ +S+   CC RYG
Sbjct: 144 SSSSTDVFLNSVSARCCRRYG 164


>05_06_0191 -
           26265460-26267016,26267858-26268356,26268789-26268859,
           26269079-26269515,26269626-26269681,26269682-26270479,
           26270918-26270973
          Length = 1157

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 58  YCKNKPYPKSRFCRGVPDPKIRIFDLGKKRA 150
           +C  +PYPK      VPD  ++    GK +A
Sbjct: 395 FCMYEPYPKGSLEDDVPDTTVQDMLCGKAKA 425


>05_01_0592 +
           5332067-5332233,5332326-5332488,5332572-5332642,
           5333311-5333420,5333457-5333528,5333599-5333634,
           5333635-5334071
          Length = 351

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -2

Query: 215 SELKCSYSSDTKCTHSGKSSTVALFLPKSKIRIFGSGTPRQNRDL 81
           +E  CS+     C  SGKSS      P  K  I+  G+ R N D+
Sbjct: 191 TEFDCSFEYCVHCICSGKSSVHVRDEPTGK--IYEVGSHRMNSDV 233


>04_04_0295 -
           24212526-24212684,24213066-24213218,24213497-24213601,
           24213694-24213913,24214033-24214199,24214323-24214497,
           24214627-24214799,24214914-24214983,24215401-24215900
          Length = 573

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 283 GTDLYRSSLRGTCCNRYGLLPAPQ 212
           G D+  ++L+   C RYGL  AP+
Sbjct: 59  GEDVDLNALKSAACRRYGLARAPK 82


>01_05_0511 -
           22831889-22832523,22833743-22833835,22834018-22834215,
           22834365-22834494,22834596-22834714,22835244-22835487,
           22835607-22835807
          Length = 539

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 265 SSLRGTCCNRYGLLPAPQNSNARTHQTLS 179
           SS+ G  C+ YG+ P+P+  + R    LS
Sbjct: 281 SSVEGRDCSYYGVCPSPRGVSRRITDELS 309


>10_08_0972 +
           21958658-21958825,21959006-21959197,21959645-21959845,
           21959920-21960009,21960424-21960591,21961100-21961354,
           21961506-21961789,21961878-21962040,21962156-21962502,
           21962726-21962759
          Length = 633

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 43  ARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVH 180
           A  +RYC +  + +S+F R    P +   DL K    V  +  C H
Sbjct: 407 AEIFRYCLDGTHERSKFLRAAA-PSVNEDDLIKLANQVSLYSGCTH 451


>09_02_0492 - 9866492-9866848
          Length = 118

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 208 SNARTHQTLSARIVGSHPLSLSFC 137
           SNA  H   S  +   HP  +SFC
Sbjct: 28  SNAACHDNFSVSLAPPHPSHVSFC 51


>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
          Length = 437

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +1

Query: 58  YCKNKPYPKSRFCRGVPDPKIRIFDL--GKKRATVDDFPLCVHLVSD 192
           +CK+ P  KS +  G+P P    FD+  GK R   ++  L   +V+D
Sbjct: 141 HCKDHPRAKSLY--GIPFPYFDTFDVIYGKDRTGREEEELSDEVVAD 185


>06_02_0263 - 13566621-13569875
          Length = 1084

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -2

Query: 296 LIRMWN*SLPQFFTRYLLQQIRPASSASELKCSYSSDT--KCTHSGKSSTVALFLPKSKI 123
           L R W   +P+   RYL Q++R    ++E    +  +   K    G++S +++   +  +
Sbjct: 372 LNRPWEDPVPEVGGRYLAQELRGVGLSAESMPEWKKEAYGKTVTFGQTSRLSILEQRQSL 431

Query: 122 RIF 114
            IF
Sbjct: 432 PIF 434


>05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517
          Length = 208

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 230 PASSASELKCSYSSDTKCTHSGKSSTVA 147
           PA++A+  +C+  S TK  H G+ + ++
Sbjct: 179 PATAAAAAQCAVPSSTKAIHVGEEAHIS 206


>11_06_0757 +
           26964983-26965048,26965470-26965874,26966921-26967814,
           26972063-26972512,26973013-26973637,26994014-26994651,
           26994967-26995032
          Length = 1047

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 230 PASSASELKCSY-SSDTKCTHSG 165
           PA+S S L+C Y  + T C H G
Sbjct: 759 PAASVSSLECGYCDAATVCDHHG 781


>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
            21497679-21497889,21497977-21498170,21498263-21498364,
            21498525-21499879,21501193-21501494,21501600-21501750,
            21501838-21502102,21502155-21502362,21502467-21502660,
            21502749-21502850,21503481-21503680,21504010-21504846,
            21505806-21506107,21506209-21506359,21506447-21506684,
            21506764-21506971,21507078-21507271,21507322-21507462,
            21513484-21514811,21515923-21516227,21516331-21516481,
            21516570-21516807,21516881-21517088,21517197-21517366,
            21517451-21517549,21517708-21519029,21521601-21521683
          Length = 3314

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 73   PYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSE 216
            P P S    G PD  +++F     R    D P   ++VS +Y+  SS+
Sbjct: 1053 PSPGSFSFGGDPDTFLQVFIWNGTRPVSRDGPWTGYMVSSQYQANSSD 1100


>09_05_0015 -
           20083143-20083308,20083645-20084017,20084362-20084675,
           20085164-20085512,20085678-20085837,20086307-20086618,
           20086700-20086820,20087225-20087277
          Length = 615

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 121 RIFDLGKKRATVDDFPL 171
           R+ DLGK+RA + D PL
Sbjct: 76  RLEDLGKRRARLQDIPL 92


>07_03_0572 -
           19604643-19604745,19604947-19605629,19605786-19606284,
           19606370-19606878,19607110-19607148,19607347-19607411,
           19609081-19609201,19610229-19610315,19611096-19611179,
           19611925-19612175,19612869-19612962,19613043-19613284,
           19614187-19614505
          Length = 1031

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 31  GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIF 129
           GRR  R  R C+ +  P++RF R V D     F
Sbjct: 49  GRRGRRPRRACEEEEKPQARFRRVVADNSYSAF 81


>07_03_0474 +
           18534071-18534238,18534349-18534445,18534992-18535122,
           18535191-18535286,18535459-18535464,18535521-18535688,
           18535892-18536020,18536613-18536673,18536928-18537031,
           18537137-18537220,18538433-18538461,18538506-18538617,
           18539200-18539313,18539767-18539832,18540237-18540309,
           18540396-18540482,18540710-18540764,18540869-18540940,
           18541039-18541101,18541177-18541294,18541377-18541451
          Length = 635

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = -2

Query: 260 FTRYLLQQIRPASSASELKCSYSSDTKCTHSGKSSTVALFLPKSKIRIFGSGTPRQNRDL 81
           F++ +L+ ++ +SS+     + S+ TK          ++   K    IF SG+P  + DL
Sbjct: 452 FSKEVLEALKDSSSSRPAIFAMSNPTKNAECTPEEAFSILGEKI---IFASGSPFSDVDL 508

Query: 80  GYG 72
           G G
Sbjct: 509 GNG 511


>06_01_1064 - 8609162-8610583
          Length = 473

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 102 TPTKPRFRIRFILTISITSRWSAPHCVLHK 13
           +P K RFR++ ++     +  SA HCV  +
Sbjct: 266 SPAKARFRLKHVVRTLTGAEDSAHHCVFQE 295


>06_01_1060 + 8522131-8523606
          Length = 491

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 102 TPTKPRFRIRFILTISITSRWSAPHCVLHK 13
           +P K RFR++ ++     +  SA HCV  +
Sbjct: 284 SPAKARFRLQHVVRTLTAAEDSAYHCVFQE 313


>06_01_0837 -
           6355315-6355342,6356185-6356361,6356579-6356662,
           6356989-6357542,6358086-6358322
          Length = 359

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 275 SLPQFFTRYLLQQIRPASSASELKCSYSSDT 183
           +LP   T+Y+LQ ++P    S   CS+S  T
Sbjct: 276 ALPANSTQYVLQALKPRIVFSAHDCSFSDYT 306


>03_05_0211 -
           22020515-22020687,22020801-22020831,22022060-22022169,
           22022715-22023102,22023344-22023397,22023739-22023849,
           22023956-22024015,22024618-22024694,22026155-22026188,
           22026267-22027235
          Length = 668

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 233 RPASSASELKCSYSSDTKCTHSGKSSTVALFLP-KSKIR 120
           RP+SS  E+K   SS  K T  GK  +  + LP K ++R
Sbjct: 550 RPSSSEKEIKDKKSSGKKVT-KGKGESAEVGLPSKDELR 587


>02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,
            8509204-8509553,8509631-8509729,8509811-8510105,
            8510200-8510405,8510498-8510689,8510766-8511163,
            8511258-8511444,8511473-8511528,8511800-8511872,
            8512012-8512872,8514353-8514778
          Length = 1134

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 34   RRPARCYRYCKNKPYPKSRFCRGVPDPKIR 123
            R P++ +RY  + P P++R  R  P P I+
Sbjct: 1026 RAPSQDWRYTPDVPRPRTRGRRRGPSPAIQ 1055


>01_07_0232 +
           42182942-42183490,42183593-42183661,42184320-42184451,
           42184547-42184600,42184714-42184758,42185383-42185522,
           42185777-42185902,42185985-42186002,42186631-42187276,
           42188121-42188843
          Length = 833

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 165 EVIHCRSLFAQVENTDLWVRHTPTKP 88
           +V+HC S  + +    LW+R  P  P
Sbjct: 473 DVVHCPSCSSYLHPPRLWLRAAPESP 498


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,139,148
Number of Sequences: 37544
Number of extensions: 185144
Number of successful extensions: 524
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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