Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A03
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 171 1e-43
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 28 1.1
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 1.1
U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 3.3
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 26 4.4
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 26 4.4
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 26 4.4
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 26 4.4
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 26 4.4
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 5.8
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 5.8
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 26 5.8
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 5.8
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 26 5.8
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 25 7.6
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 171 bits (415), Expect = 1e-43
Identities = 74/90 (82%), Positives = 80/90 (88%)
Frame = +1
Query: 28 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHL 207
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E EHL
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 208 SSEALEAGRICCNKYLVKNCGKDQFHIRMR 297
SSEALEA RIC NKY+VKNCGKD FH+R+R
Sbjct: 61 SSEALEAARICANKYMVKNCGKDGFHLRVR 90
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 106 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQSDL 5
AH +K I D + NI+ ISLVG PL + Q+ +
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQTQI 843
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 106 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQSDL 5
AH +K I D + NI+ ISLVG PL + Q+ +
Sbjct: 840 AHSNKLNIGDQII--NINGISLVGLPLSAAQTQI 871
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 106 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQSDL 5
AH +K I D + NI+ ISLVG PL + Q+ +
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQTQI 843
>U23511-5|AAC46794.1| 578|Caenorhabditis elegans Hypothetical
protein C32D5.6 protein.
Length = 578
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 85 SRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEA 219
S+ RG+ + R++++ K +DD+ L L HLS A
Sbjct: 454 SKMVRGIVEDMDRVWEMKKSTCDIDDYCLYYFLKGVALRHLSLHA 498
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -3
Query: 235 YGLLPAPQNSN--ARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSY 62
Y L P PQ S +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 61 NIDN 50
+ N
Sbjct: 288 DHQN 291
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 52 YRYCKNKPYPKSRFCRGVP--DPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALE 225
Y +C P RFCRG P + ++F VD P+ ++L Y H +A E
Sbjct: 958 YEWCGQ--CPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYL---RYNHSQEQACE 1012
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 52 YRYCKNKPYPKSRFCRGVP--DPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALE 225
Y +C P RFCRG P + ++F VD P+ ++L Y H +A E
Sbjct: 961 YEWCGQ--CPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYL---RYNHSQEQACE 1015
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 52 YRYCKNKPYPKSRFCRGVP--DPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALE 225
Y +C P RFCRG P + ++F VD P+ ++L Y H +A E
Sbjct: 958 YEWCGQ--CPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYL---RYNHSQEQACE 1012
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 88 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEHLSSEALEAGR 234
R C + K I D K+ A ++ + +++ EYE ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 272 LPQFFTRYLLQQIRPA--SSASELKCSYSSDTKCTHSGKSSTVALFLP 135
L +FF +L Q+IR A SS S S SS + S SS+ + + P
Sbjct: 212 LMEFFRYFLTQRIRHARDSSGSHESYSGSSSSSSYSSSDSSSYSSYTP 259
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 106 PDPKIRIFDLGKKRATVDDFPLCVHLV 186
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 106 PDPKIRIFDLGKKRATVDDFPLCVHLV 186
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 97 RGVPDPKIRIFDLGKKRATVDDF 165
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 97 RGVPDPKIRIFDLGKKRATVDDF 165
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 97 RGVPDPKIRIFDLGKKRATVDDF 165
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 97 RGVPDPKIRIFDLGKKRATVDDF 165
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Frame = +2
Query: 215 RRWKQAVSVATSTS-----*RTAVKISSTS 289
RRWK+ V +AT+TS R+ V+ +STS
Sbjct: 504 RRWKKVVPIATNTSVSSSTPRSVVRTTSTS 533
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 97 RGVPDPKIRIFDLGKKRATVDDF 165
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -1
Query: 153 CRSLFAQVENTDLWVRHT--PTKPRFRIRFILTISITSRWSAPHCVL--HKAT 7
C A + NTD + T P +PRFR ++T T + HC + H AT
Sbjct: 234 CEQNSATLPNTDQQLSPTLSPNEPRFRN--LITSEPTPSFECKHCTIKFHDAT 284
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 40 PARCYRYCKNKPYPKSRFCRGVPDPKIRIF 129
PA CYR P P++ +GVP R+F
Sbjct: 166 PAVCYRTIYTLPPPENFAAQGVPSAFNRMF 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,580,737
Number of Sequences: 27780
Number of extensions: 150883
Number of successful extensions: 439
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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