Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_A01
         (365 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D14662-1|BAA03496.1|  224|Homo sapiens KIAA0106 protein.               48   7e-06
DQ230990-1|ABB02185.1|  224|Homo sapiens peroxiredoxin 6 protein.      48   7e-06
BC053550-1|AAH53550.1|  224|Homo sapiens peroxiredoxin 6 protein.      48   7e-06
BC035857-1|AAH35857.1|  224|Homo sapiens peroxiredoxin 6 protein.      48   7e-06
AL139142-1|CAI20936.1|  224|Homo sapiens peroxiredoxin 6 protein.      48   7e-06
AJ844621-1|CAH59743.1|   86|Homo sapiens peroxiredoxin 6 protein.      36   0.040

>D14662-1|BAA03496.1|  224|Homo sapiens KIAA0106 protein.
          Length = 224

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +2

Query: 197 MLLGDIFPNFTAVTTDGEIELYEWLGNSWGILF 295
           +LLGD+ PNF A TT G I  +++LG+SWGILF
Sbjct: 5   LLLGDVAPNFEANTTVGRIRFHDFLGDSWGILF 37



 Score = 35.9 bits (79), Expect = 0.040
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 297 SHPSDFTPVCTTELAR 344
           SHP DFTPVCTTEL R
Sbjct: 38  SHPRDFTPVCTTELGR 53


>DQ230990-1|ABB02185.1|  224|Homo sapiens peroxiredoxin 6 protein.
          Length = 224

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +2

Query: 197 MLLGDIFPNFTAVTTDGEIELYEWLGNSWGILF 295
           +LLGD+ PNF A TT G I  +++LG+SWGILF
Sbjct: 5   LLLGDVAPNFEANTTVGRIRFHDFLGDSWGILF 37



 Score = 35.9 bits (79), Expect = 0.040
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 297 SHPSDFTPVCTTELAR 344
           SHP DFTPVCTTEL R
Sbjct: 38  SHPRDFTPVCTTELGR 53


>BC053550-1|AAH53550.1|  224|Homo sapiens peroxiredoxin 6 protein.
          Length = 224

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +2

Query: 197 MLLGDIFPNFTAVTTDGEIELYEWLGNSWGILF 295
           +LLGD+ PNF A TT G I  +++LG+SWGILF
Sbjct: 5   LLLGDVAPNFEANTTVGRIRFHDFLGDSWGILF 37



 Score = 35.9 bits (79), Expect = 0.040
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 297 SHPSDFTPVCTTELAR 344
           SHP DFTPVCTTEL R
Sbjct: 38  SHPRDFTPVCTTELGR 53


>BC035857-1|AAH35857.1|  224|Homo sapiens peroxiredoxin 6 protein.
          Length = 224

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +2

Query: 197 MLLGDIFPNFTAVTTDGEIELYEWLGNSWGILF 295
           +LLGD+ PNF A TT G I  +++LG+SWGILF
Sbjct: 5   LLLGDVAPNFEANTTVGRIRFHDFLGDSWGILF 37



 Score = 35.9 bits (79), Expect = 0.040
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 297 SHPSDFTPVCTTELAR 344
           SHP DFTPVCTTEL R
Sbjct: 38  SHPRDFTPVCTTELGR 53


>AL139142-1|CAI20936.1|  224|Homo sapiens peroxiredoxin 6 protein.
          Length = 224

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +2

Query: 197 MLLGDIFPNFTAVTTDGEIELYEWLGNSWGILF 295
           +LLGD+ PNF A TT G I  +++LG+SWGILF
Sbjct: 5   LLLGDVAPNFEANTTVGRIRFHDFLGDSWGILF 37



 Score = 35.9 bits (79), Expect = 0.040
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 297 SHPSDFTPVCTTELAR 344
           SHP DFTPVCTTEL R
Sbjct: 38  SHPRDFTPVCTTELGR 53


>AJ844621-1|CAH59743.1|   86|Homo sapiens peroxiredoxin 6 protein.
          Length = 86

 Score = 35.9 bits (79), Expect = 0.040
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +3

Query: 297 SHPSDFTPVCTTELAR 344
           SHP DFTPVCTTEL R
Sbjct: 25  SHPRDFTPVCTTELGR 40



 Score = 33.9 bits (74), Expect = 0.16
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 224 FTAVTTDGEIELYEWLGNSWGILF 295
           F A TT G I  +++LG+SWGILF
Sbjct: 1   FEANTTVGRIRFHDFLGDSWGILF 24


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,301,999
Number of Sequences: 237096
Number of extensions: 1182979
Number of successful extensions: 5783
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5783
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)