Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_A01
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 36 0.007
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 29 1.0
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 29 1.0
U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeas... 28 2.4
U23519-9|ABS19470.1| 203|Caenorhabditis elegans Hypothetical pr... 28 2.4
AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical... 28 2.4
AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical... 27 3.1
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl... 27 5.4
AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical ... 26 7.2
AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical... 26 9.5
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 36.3 bits (80), Expect = 0.007
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 297 SHPSDFTPVCTTELA 341
SHP+DFTPVCTTELA
Sbjct: 35 SHPADFTPVCTTELA 49
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 197 MLLGDIFPNFTAVTTDGEIE-LYEWLGNSWGILF 295
M LGD PNFT T + + L+ ++G W +LF
Sbjct: 1 MKLGDTVPNFTFETDLRKNQTLHNYIGEQWLMLF 34
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 258 CMSGSEIHGESFSSHPSDFTPVCTTELARDTQTF 359
C +++G + SDFT VC ++L TQTF
Sbjct: 207 CRLADDMYGLFDNKQFSDFTLVCKSDLGSPTQTF 240
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 258 CMSGSEIHGESFSSHPSDFTPVCTTELARDTQTF 359
C +++G + SDFT VC ++L TQTF
Sbjct: 249 CRLADDMYGLFDNKQFSDFTLVCKSDLGSPTQTF 282
>U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 61 TAAFHCFPIVLFVWVLSRLV 2
TA CF VLFVWV +RLV
Sbjct: 215 TALTICFAGVLFVWVATRLV 234
>U23519-9|ABS19470.1| 203|Caenorhabditis elegans Hypothetical
protein F26G1.11 protein.
Length = 203
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 160 LHQYNHLLHYLKNATWRYFP*FYSGYY*WRDRVV*VARK 276
+H Y H L+YL+ +++ + +Y WR R V + RK
Sbjct: 140 IHIYRHWLYYLQTNSFKSLETIFRRHY-WRARPVKINRK 177
>AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical
protein Y47D3A.17c protein.
Length = 842
Score = 27.9 bits (59), Expect = 2.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = -3
Query: 306 KDETKRIPHEFPS-----HSYNSISPSVVTAVKLGKISPSSIFQIVQQMVVL---VEWSV 151
K K P +FPS S+ S SPS T L +SPSS+ +Q+ + + ++
Sbjct: 62 KSGDKDPPRQFPSLLTSCSSFYSSSPSTSTYCSLSSLSPSSLPPPLQKSTKIHRRIMGTL 121
Query: 150 RGTSRQ 133
RG RQ
Sbjct: 122 RGRLRQ 127
>AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical
protein Y38H6C.11 protein.
Length = 363
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 327 CKLV*NRKDETKRIPHEFPSHS-YNSISPSVVTAVKLGKI 211
C++ N+ KR+ EFP S + SI P +++ ++ +I
Sbjct: 121 CRIFRNKNSNAKRVVFEFPFRSTHRSIMPLLISELEKSEI 160
>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
protein 17 protein.
Length = 1146
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 312 NRKDETKRIPHEFPSHSYNSISPSVVTAVKLGKISPSSIFQI 187
NRK++ + I ++ +N+I PS++T L +I+P+ + I
Sbjct: 804 NRKEKPEEIIYQLKKGGFNAIRPSLLTDEAL-EINPALVHLI 844
>AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical
protein ZK250.6 protein.
Length = 843
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 264 SYNSISPSVVTAVKLGKISPSSIFQIVQQMVVLVEWSVRGTSR 136
S++ ISP T+VKL I ++ ++ ++ ++ WS G R
Sbjct: 2 SFSLISP---TSVKLLNIEAGNVCVVLDHLMGIIVWSANGCCR 41
>AC024746-10|AAF60400.2| 483|Caenorhabditis elegans Hypothetical
protein Y110A2AL.2 protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 244 ISSNRCKIRENISK*HFSNSATDGCIG 164
+ NRC REN++ +FS++ T C G
Sbjct: 170 VEGNRCCARENVTD-NFSSNRTQTCRG 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,035,879
Number of Sequences: 27780
Number of extensions: 183163
Number of successful extensions: 408
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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