Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P22
         (383 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolo...    30   2.9  
AB209277-1|BAD92514.1| 1231|Homo sapiens son of sevenless homolo...    30   2.9  
L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchan...    29   3.9  

>BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolog 2
           (Drosophila) protein.
          Length = 1332

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 191 HHIYQYERDLRLVTSFESTIS 253
           HH Y +ERDL L+   ES IS
Sbjct: 697 HHFYDFERDLELLERLESFIS 717


>AB209277-1|BAD92514.1| 1231|Homo sapiens son of sevenless homolog 2
           variant protein.
          Length = 1231

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 191 HHIYQYERDLRLVTSFESTIS 253
           HH Y +ERDL L+   ES IS
Sbjct: 727 HHFYDFERDLELLERLESFIS 747


>L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchange
           factor protein.
          Length = 1332

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 191 HHIYQYERDLRLVTSFESTIS 253
           HH Y +ERDL L+   ES IS
Sbjct: 697 HHYYDFERDLELLERLESFIS 717


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,133,339
Number of Sequences: 237096
Number of extensions: 774465
Number of successful extensions: 1245
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)