Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P22
         (383 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   2.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   4.9  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   6.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   8.6  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   8.6  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 166 KISPFDDDKDTH 131
           KISPF  D+D H
Sbjct: 612 KISPFTADRDLH 623


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 150 MMIRTHTLLIYSNTDYLSHKI 88
           M+   +TL+IY N D   H++
Sbjct: 204 MVDNKNTLIIYQNADDSFHRL 224


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 157 PFDDDKDTHTVNIFQHRLFVTQDLN 83
           PF+ +K  H V   QH +    + N
Sbjct: 448 PFELEKALHNVMFIQHHIQRQDEFN 472


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 133 VCPYHHQTDLF 165
           V PY HQTD++
Sbjct: 148 VPPYSHQTDVW 158


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 96  HKI*INNQLKK*LFENVD*KNEFVRETR 13
           H+I I   +   L EN+    E++ ETR
Sbjct: 327 HRICIGETMPMELIENLRNHPEYIDETR 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,883
Number of Sequences: 438
Number of extensions: 1825
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)