Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P21
(382 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.14c |cox17||metallochaperone Cox17|Schizosaccharomyces ... 73 1e-14
SPBPB21E7.04c ||SPAPB21E7.04c, SPAPB21E7.04c|S-adenosylmethionin... 28 0.57
SPBC1703.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 1.7
SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 3.0
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 25 3.0
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 25 5.3
SPCC320.14 ||SPCC330.15c|threo-3-hydroxyaspartate ammonia-lyase ... 25 5.3
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 25 5.3
SPAC1687.07 |||conserved fungal protein|Schizosaccharomyces pomb... 24 7.0
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 24 9.3
>SPBC26H8.14c |cox17||metallochaperone Cox17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 70
Score = 73.3 bits (172), Expect = 1e-14
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +2
Query: 68 MGSANAKAVEAKITESPALVNTEKPKLKPCCACPETKKVRDACIIE--NGEENCGPLIEE 241
M S+ + K++E + + EKPK PCCACPETK+ RDAC+++ NG C LIE
Sbjct: 1 MSSSTEPSTATKVSEPAPIASEEKPK--PCCACPETKQARDACMLQSSNGPIECAKLIEA 58
Query: 242 HKACMRKMGFNI 277
HK CM + G+ +
Sbjct: 59 HKKCMAQYGYEV 70
>SPBPB21E7.04c ||SPAPB21E7.04c,
SPAPB21E7.04c|S-adenosylmethionine-dependent
methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 281
Score = 27.9 bits (59), Expect = 0.57
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 240 SSINGPQFSSPFSIIHASRTFLV 172
S++NGPQF ++II+ S+T V
Sbjct: 240 SNVNGPQFIGKWNIIYKSKTIKV 262
>SPBC1703.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 1 ARGCISLLYRNSLLFLILLY 60
+R CI LL++NSL+ L Y
Sbjct: 150 SRNCIKLLFKNSLVLLAACY 169
>SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 225
Score = 25.4 bits (53), Expect = 3.0
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = -1
Query: 367 ICNLTHYIKYLIVM*LTKQCQLKISNLKRLDVKTHLPHASFVFFYQWTTIFFSILNYTCI 188
I +L H +YL++ + ++ + L + + H S++F + + SIL+++
Sbjct: 91 ITSLNHP-EYLLLGGYSYGARISMHKSITLAIDKRISHVSYLFLAPYLGLGSSILSWSWG 149
Query: 187 AHFFSFRTGATRLQFW 140
F SF T + L W
Sbjct: 150 LGFESFSTDSKVLFVW 165
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 25.4 bits (53), Expect = 3.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 140 PKLKPCCACPETKKVRDACIIENGEENCGPLIEEHKACMRKMGFNI 277
PKLKP PE V + +++NG C +++ + C + FNI
Sbjct: 744 PKLKPGAPIPEEYLVENLDLVKNG---CSNMVKHIQNCHK---FNI 783
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 24.6 bits (51), Expect = 5.3
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3
Query: 77 RYPSLQYKSIKNNREFLYNNE 15
R + ++S+KNNR++L N +
Sbjct: 118 RLGRISFRSVKNNRDYLRNRK 138
>SPCC320.14 ||SPCC330.15c|threo-3-hydroxyaspartate ammonia-lyase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 323
Score = 24.6 bits (51), Expect = 5.3
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -2
Query: 231 NGPQFSSPFSIIHAS--RTFLVSGQAQHGFNFGFSVLTNAGDSVIFAS 94
+G Q SI+H +T Q QH N+ FS++ D ++ S
Sbjct: 214 DGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEKVDDILTVS 261
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 24.6 bits (51), Expect = 5.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 95 QQLSHSRYPSLQYKSIKNNREFLYNNEMHP 6
Q+L+H + S + IK N+E + NN+M P
Sbjct: 58 QRLTHEK--STMLEKIKENQEKISNNKMLP 85
>SPAC1687.07 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 124
Score = 24.2 bits (50), Expect = 7.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -3
Query: 80 SRYPSLQYKSIKNNREFLYNNEMH 9
SRY S++Y ++N+ E +NN ++
Sbjct: 31 SRYRSIRYSPVENSFEADFNNGLN 54
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 23.8 bits (49), Expect = 9.3
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -2
Query: 264 IFLMQALCSSINGPQFSSPFSIIHASRTFLVSGQAQHGFNFGFSVL 127
I+L+ +L NG FS+ +HA+ + ++S ++ FG ++
Sbjct: 679 IYLLHSLALLTNGTLFST----VHAAYSSILSSIEEYHLRFGLKLM 720
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,493,027
Number of Sequences: 5004
Number of extensions: 28954
Number of successful extensions: 84
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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