Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P21
(382 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099919-12|AAC68797.1| 63|Caenorhabditis elegans Hypothetical... 91 3e-19
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 30 0.64
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 29 0.85
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p... 28 2.6
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z36948-2|CAA85410.1| 268|Caenorhabditis elegans Hypothetical pr... 27 4.5
L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein ( Caeno... 27 4.5
AF000191-3|AAB52882.1| 522|Caenorhabditis elegans Mediator prot... 27 4.5
AL032637-16|CAA21624.1| 169|Caenorhabditis elegans Hypothetical... 27 6.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr... 26 7.9
U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical p... 26 7.9
AF026209-5|AAB71279.2| 344|Caenorhabditis elegans Serpentine re... 26 7.9
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 26 7.9
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 26 7.9
>AF099919-12|AAC68797.1| 63|Caenorhabditis elegans Hypothetical
protein F40G9.2 protein.
Length = 63
Score = 90.6 bits (215), Expect = 3e-19
Identities = 44/59 (74%), Positives = 47/59 (79%)
Frame = +2
Query: 101 KITESPALVNTEKPKLKPCCACPETKKVRDACIIENGEENCGPLIEEHKACMRKMGFNI 277
K TE+ + V EK KLK CCACPETK+VRDACIIENGEE CG LIE HKACMR GFNI
Sbjct: 7 KSTEAGS-VAPEK-KLKACCACPETKRVRDACIIENGEEKCGKLIEAHKACMRAAGFNI 63
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 29.9 bits (64), Expect = 0.64
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 166 TGATRLQFWFFSINQCRRLRNFCFNSFRIRATHLCNIRVLKI 41
T LQF + NQ R + N FN R+ L N R+ +I
Sbjct: 48 TQLNNLQFLYLDNNQLRIIPNLAFNHLRLVVLMLANNRITEI 89
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 110 P*FLLQQLSHSRYPSLQYKSIKNNREFLYNNEMHP 6
P F Q SH YP N EF+ N+++HP
Sbjct: 135 PNFFSSQNSHHMYPDQYTPRTWQNNEFMPNHQVHP 169
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 SYIAKMGSANAKAVEAKITESPALVNTEKPKLKPCCA-CPETKK 181
+Y+ + G +KAV+ + SP + EKPK K A P TKK
Sbjct: 327 TYVDEDGYLVSKAVQKAVECSPQKASPEKPKPKVITAPAPGTKK 370
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical
protein R134.1 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 148 EAVLRLSGN*KSARCMYN*EWRRKL 222
++ LRL GN +SA C+ N W+ KL
Sbjct: 675 KSFLRLHGNLRSATCLVNDSWQVKL 699
>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 157 LRLSGN*KSARCMYN*EWRRKL 222
LRL GN +SA C+ N W+ KL
Sbjct: 679 LRLHGNLRSATCLVNDSWQVKL 700
>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 157 LRLSGN*KSARCMYN*EWRRKL 222
LRL GN +SA C+ N W+ KL
Sbjct: 679 LRLHGNLRSATCLVNDSWQVKL 700
>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical
protein R134.2 protein.
Length = 1118
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 157 LRLSGN*KSARCMYN*EWRRKL 222
LRL GN +SA C+ N W+ KL
Sbjct: 680 LRLHGNLRSATCLVNDSWQVKL 701
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 155 CCACPETKKVRDACIIENGEENCGPLIEEHKACMRK 262
CC+ +T+K + C+ + G IEE C RK
Sbjct: 418 CCSISKTRKRQSECLEGQFKCGTGQCIEESLKCNRK 453
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 155 CCACPETKKVRDACIIENGEENCGPLIEEHKACMRK 262
CC+ +T+K + C+ + G IEE C RK
Sbjct: 418 CCSISKTRKRQSECLEGQFKCGTGQCIEESLKCNRK 453
>Z36948-2|CAA85410.1| 268|Caenorhabditis elegans Hypothetical
protein D2089.3 protein.
Length = 268
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 152 PCCACPETKKVRDACIIENGEENCGPLIEEHK 247
PC AC + + DAC + G C P + +
Sbjct: 218 PCSACNQPVCMSDACSLFFGANFCAPCVSRER 249
>L00665-1|AAA28148.1| 537|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc4, complete
cds. ).
Length = 537
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 226 TTIFFSILNYTCIAH---FFSFRTGATRLQFWFFSINQCRRLRNF-CFNSFRIRATHLCN 59
+T F + Y CI H + TG L F +C R + F CFN F + HLC+
Sbjct: 482 STPFLTPAQY-CIDHGDTVICYHTGCNHLGFI-----RCARCKMFVCFNHFVVSKQHLCS 535
>AF000191-3|AAB52882.1| 522|Caenorhabditis elegans Mediator protein
1.2 protein.
Length = 522
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 168 GQAQHGFNFGFSVLTNAGDSVI 103
GQ QH +N + L N GDSVI
Sbjct: 345 GQTQHFYNVDVNQLRNDGDSVI 366
>AL032637-16|CAA21624.1| 169|Caenorhabditis elegans Hypothetical
protein Y43F8C.17 protein.
Length = 169
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 59 YKSIKNNREFLYNNEMHP 6
Y +IKN F+Y NE+ P
Sbjct: 139 YNAIKNEARFMYKNELKP 156
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 134 EKPKLKPCCACPETKKVRDACIIENGEENC 223
+ PK KPC C + D C+ E+G+ C
Sbjct: 465 DAPKCKPC-ECNVNGTIGDVCLPEDGQCPC 493
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 134 EKPKLKPCCACPETKKVRDACIIENGEENC 223
+ PK KPC C + D C+ E+G+ C
Sbjct: 465 DAPKCKPC-ECNVNGTIGDVCLPEDGQCPC 493
>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical
protein ZK970.6 protein.
Length = 1122
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 148 EAVLRLSGN*KSARCMYN*EWRRKL 222
++ L L GN +SA C+ N W+ KL
Sbjct: 667 KSFLHLHGNLRSATCLVNDSWQVKL 691
>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical
protein ZK970.5 protein.
Length = 1143
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 148 EAVLRLSGN*KSARCMYN*EWRRKLWSIDRRTQSLHEED 264
++ LR GN +SA C+ N W+ KL D Q L +E+
Sbjct: 679 KSFLRHHGNLRSATCLVNDSWQVKL--ADFGLQFLQDEE 715
>U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical
protein T20D4.19 protein.
Length = 139
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 125 VNTEKPKL-KPCCACPETKKVRDA-CIIENG 211
++T P L + C CP T+KV+D+ C +G
Sbjct: 10 ISTVLPSLAEGACVCPATRKVKDSNCTTADG 40
>AF026209-5|AAB71279.2| 344|Caenorhabditis elegans Serpentine
receptor, class j protein25 protein.
Length = 344
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 235 YQWTTIFFSILNYTC 191
Y+W +FF+I N TC
Sbjct: 40 YRWLLLFFAIFNMTC 54
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 134 EKPKLKPCCACPETKKVRDACIIENGEENC 223
+ PK KPC C + D C+ E+G+ C
Sbjct: 465 DAPKCKPC-ECNVNGTIGDVCLPEDGQCPC 493
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 134 EKPKLKPCCACPETKKVRDACIIENGEENC 223
+ PK KPC C + D C+ E+G+ C
Sbjct: 465 DAPKCKPC-ECNVNGTIGDVCLPEDGQCPC 493
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,265,512
Number of Sequences: 27780
Number of extensions: 164770
Number of successful extensions: 479
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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