Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P19
(366 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 184 2e-47
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 181 2e-46
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 171 1e-43
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 89 1e-18
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 85 1e-17
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 85 2e-17
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 85 2e-17
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 82 1e-16
03_01_0034 + 318432-318825,318902-319851 81 3e-16
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 80 5e-16
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 80 5e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 76 1e-14
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 76 1e-14
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 31 0.21
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.28
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 30 0.48
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 29 0.85
12_02_0823 + 23461423-23462124 29 1.1
12_02_0070 - 13164738-13164809,13165187-13165501 29 1.1
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.1
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 1.5
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 28 2.6
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 2.6
02_01_0108 - 789597-790224,790441-790570,790946-791081 28 2.6
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 28 2.6
02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246 27 4.5
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 6.0
04_04_0750 + 27763841-27763972,27764311-27764485,27764908-277649... 27 6.0
12_02_0007 + 12233650-12233913 26 7.9
07_01_0284 - 2082249-2082256,2082496-2083009 26 7.9
04_04_0482 - 25547393-25547455,25547767-25547866,25548154-255482... 26 7.9
04_03_0735 + 19141038-19143227 26 7.9
03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 26 7.9
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646... 26 7.9
01_07_0186 - 41857468-41857759,41857856-41857977,41858148-418582... 26 7.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 184 bits (448), Expect = 2e-47
Identities = 77/90 (85%), Positives = 86/90 (95%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGG D+FNT+FSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAVFVDLEPTV+DEVRTG YRQL+HPE
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPE 90
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 181 bits (440), Expect = 2e-46
Identities = 75/90 (83%), Positives = 86/90 (95%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGG D+FNT+FSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAVFVDLEPTV+DEVRTG YRQL+HPE
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPE 90
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 171 bits (417), Expect = 1e-43
Identities = 70/90 (77%), Positives = 84/90 (93%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G +D+FNT+FSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRA+FVDLEPTV+DEVRTG+YRQL+HPE
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPE 90
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 88.6 bits (210), Expect = 1e-18
Identities = 41/96 (42%), Positives = 58/96 (60%)
Frame = +3
Query: 78 QKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFS 257
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N Y++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQ--LERVNVYYN 232
Query: 258 ETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
E G+ VPRAV +DLEP +D VRTG Y Q++ P+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPD 268
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 85.4 bits (202), Expect = 1e-17
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +3
Query: 207 TDKTIGGGYDSFNTYFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
+D T G D+FNT+FSET +GK VPRA+FVDLEPTV+DEV+TG YRQL+HPE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPE 150
Score = 81.4 bits (192), Expect = 2e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 212
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 84.6 bits (200), Expect = 2e-17
Identities = 39/90 (43%), Positives = 54/90 (60%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N Y++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQ--LERVNVYYNEASCGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D VRTG Y Q++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPD 88
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 84.6 bits (200), Expect = 2e-17
Identities = 39/90 (43%), Positives = 54/90 (60%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG+ WE+ C EHGI P G+ + + N Y++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQ--LERVNVYYNEASCGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D VRTG Y Q++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPD 88
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/90 (42%), Positives = 53/90 (58%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG WE+ C EHGI G+ D + + N Y++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQ--LERINVYYNEASGGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D VR+G Y Q++ P+
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPD 88
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 81.0 bits (191), Expect = 3e-16
Identities = 37/90 (41%), Positives = 52/90 (57%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG WE+ C EHGI G+ D + + N Y++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQ--LERVNVYYNEASCGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D VR+G Y ++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPD 88
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 80.2 bits (189), Expect = 5e-16
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N Y++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQ--LERINVYYNEASGGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D VR+G + Q++ P+
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPD 88
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 80.2 bits (189), Expect = 5e-16
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG WE+ C EHGI G+ D + + N Y++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQ--LERINVYYNEASGGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D VR+G + Q++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPD 88
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 75.8 bits (178), Expect = 1e-14
Identities = 38/89 (42%), Positives = 52/89 (58%)
Frame = +3
Query: 99 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGKD 278
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + +F +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 279 VPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
+PRA+ VDLEP V++ ++ YR LY+ E
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHE 89
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 75.8 bits (178), Expect = 1e-14
Identities = 36/90 (40%), Positives = 50/90 (55%)
Frame = +3
Query: 96 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGK 275
MRE + + GQ G QIG WE+ C EHG+ P G T + N YF+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 276 DVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 365
VPRAV +DLEP +D +R+G ++ P+
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPD 88
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 195 GQMPTDKTIGGGYDSFNTYF 254
GQMP+ +GG Y FNTYF
Sbjct: 240 GQMPSTSRLGGKYHIFNTYF 259
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 235 SYPPPMVLSVGI*PSGWMPCSRQYSSQ 155
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 30.3 bits (65), Expect = 0.48
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 139 RSEMPAGSCIALSTASNLMVRCQLTRPSGVDTTPSTRTSARPELARTFPVPSSSILNPL 315
+S MP + + TA+ L R LT S V++ P + T P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.5 bits (63), Expect = 0.85
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 229 PPPMVLSVGI*PSGWMPCSRQYSSQ 155
P P+ LSV + SGW+PC+R ++
Sbjct: 150 PYPVNLSVSVGLSGWLPCARSLKNK 174
>12_02_0823 + 23461423-23462124
Length = 233
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 130 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVDTTPSTRTSARP-ELARTFPVPS 294
P S+ + AG + TA RC LTR +G D P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>12_02_0070 - 13164738-13164809,13165187-13165501
Length = 128
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = -2
Query: 332 ADLVNYSGFKIDEDGTGNVLASSGL-----AEVRVEGVVSTPD 219
A L+++ G+ + GTGN ASS EV VEG V+ D
Sbjct: 23 ASLLDWLGYNCERGGTGNDAASSASRWENNGEVEVEGAVALED 65
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 229 PPPMVLSVGI*PSGWMPCSR 170
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 223 PMVLSVGI*PSGWMPCSRQYSSQ 155
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -2
Query: 269 SSGLAEVRVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVYRDALTH 96
S+ V G + P+ + ++ I L + A+ +PAG + GLA RD + H
Sbjct: 205 SASKLPVSAPGRAALPNATPNLNIGIDLWSTPPALAVPAGQGEASPGLALARRDGVAH 262
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 142 SEMPAGSCIALSTASNLMVRCQLTRPSGVDTTPSTRTSARPELARTFPVPSSSI 303
SE+P S + S A ++ PS + T T++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTV---TASRPSSAPVFPAPRSTV 918
>02_01_0108 - 789597-790224,790441-790570,790946-791081
Length = 297
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 283 GTSLPAPVSLKYVLKESYPPPMVLSVGI*PSGWMPCSRQYSSQQAFPIWTPAWPTCT 113
G S PAPV+ + + P V + WMP S + Q+++ I WP T
Sbjct: 183 GISAPAPVAEPF---DQQPKSFVFT-----GDWMPMSAAAAGQESYSISAQHWPAST 231
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 27.9 bits (59), Expect = 2.6
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 97 CVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVDTTPSTRTSARPE-LA 273
CV A + T E + + G + L + Q T+P +D T TS PE +A
Sbjct: 32 CVVAEV-TYDPAEMKGDRDGGFTV-LGNYIGALGNPQNTKPEKIDMTAPVITSGEPESIA 89
Query: 274 RTFPVPSSSILNPL*LT 324
T PV +S P+ +T
Sbjct: 90 MTAPVITSGEPEPVAMT 106
>02_04_0323 + 22026866-22027016,22029569-22029949,22030114-22031246
Length = 554
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -2
Query: 332 ADLVNYSGFKIDEDGTGNVLASSGL-AEVRVEGVVSTPDGLVSWHLTIRLDAVLKAIQLP 156
AD++NY + G L + + A + + G PD S L RLD +++
Sbjct: 229 ADMINYRATTMARWGWRLSLGAGIVPAVIVIVGAAFIPDTPNSLALRGRLDEARDSLRRI 288
Query: 155 AGISDLDSGLANVYRDA 105
G +D+D+ L ++ R A
Sbjct: 289 RGAADVDAELKDIVRAA 305
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 147 NACWELYCLEHGI 185
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>04_04_0750 +
27763841-27763972,27764311-27764485,27764908-27764998,
27764999-27765133,27765683-27765742,27765876-27765951,
27766037-27766174,27766509-27767373,27767763-27767865,
27768101-27768176,27768329-27768393,27768463-27768493,
27768618-27768725
Length = 684
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 159 ELYCLEHGIQPDGQMPTDKTIGGGYDSFNTYFSETGAGKDVPR 287
EL C GI+ +G G S TYFSETG + R
Sbjct: 643 ELICACIGIELSNPQAHGNLLGSGTQS--TYFSETGTFSKIKR 683
>12_02_0007 + 12233650-12233913
Length = 87
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 257 RDRSWQGRSPCRLRRS*THCS*RGPHWHIQTVVSS 361
R +W GR+PCR + G W + T +S+
Sbjct: 38 RGWAWSGRTPCRPTAAEQSRKAMGQCWRVLTAISA 72
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 268 APVSLKYVLKESYPPPMVLSVGI*PSGWMPCSRQYSSQQAFPI 140
+P+ K E PPP + I W P + ++QQ PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>04_04_0482 -
25547393-25547455,25547767-25547866,25548154-25548203,
25548883-25548969,25549343-25549429,25549510-25550009,
25550061-25550134,25550548-25551632
Length = 681
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -2
Query: 344 VCASADLVNYSGFKIDEDGTGNVL 273
+C+++ L++Y ++D G GNV+
Sbjct: 263 ICSTSGLLHYPDTQVDASGKGNVI 286
>04_03_0735 + 19141038-19143227
Length = 729
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 37 LNDD*LIILSTLKFKKLNTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTR 216
L+D+ +L K K + V+ +YT K ++ + A + A+ TR
Sbjct: 113 LSDNSKKVLYDQKRKDHSVVNVTNGMYTYDKKANKRARKNAAAAAAAAAAAAAAAEATTR 172
Query: 217 PSGVDT 234
P+GVDT
Sbjct: 173 PAGVDT 178
>03_05_1078 +
30205876-30206346,30206624-30207001,30207967-30208092,
30209569-30209805
Length = 403
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 117 HVGQAGVQIGNACWELYCLEHGIQPDGQMP 206
H G V++ AC+ L L++G + DG P
Sbjct: 373 HEGDGSVEVDEACFYLMGLDYGPKRDGFGP 402
>02_05_0391 +
28563242-28563302,28563714-28563931,28564563-28564637,
28564730-28565264,28565343-28565523,28565586-28565724,
28565826-28566067,28566157-28566322,28566591-28566698
Length = 574
Score = 26.2 bits (55), Expect = 7.9
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 108 CTHAFCIEFFELKCR 64
C+H+FC++ E +CR
Sbjct: 305 CSHSFCVKCMETQCR 319
>01_07_0186 -
41857468-41857759,41857856-41857977,41858148-41858269,
41858439-41858547,41860076-41860174,41860251-41860384,
41860645-41860732,41860913-41860959,41861626-41861692,
41861783-41862004
Length = 433
Score = 26.2 bits (55), Expect = 7.9
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -2
Query: 275 LASSGLAEVRVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVYRDALTH 96
L SGL + ++ STP+ + + +L+ V KAI +PA +L G++ + A+
Sbjct: 165 LIFSGLMTIGMKDYSSTPENFKAL-VNCKLE-VCKAIDMPAEQFELSMGMSGDFEQAVAS 222
Query: 95 FVLSFLNLS 69
+ +LS
Sbjct: 223 SMAGSEDLS 231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,331,450
Number of Sequences: 37544
Number of extensions: 257390
Number of successful extensions: 840
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -