Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P13
(263 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4E4A Cluster: PREDICTED: similar to ribosomal ... 161 3e-39
UniRef50_P27635 Cluster: 60S ribosomal protein L10; n=53; Fungi/... 157 5e-38
UniRef50_Q5B047 Cluster: Putative uncharacterized protein; n=1; ... 153 7e-37
UniRef50_Q96L21 Cluster: 60S ribosomal protein L10-like; n=168; ... 152 1e-36
UniRef50_Q9M5M7 Cluster: 60S ribosomal protein L10; n=52; Eukary... 136 7e-32
UniRef50_Q6LAD9 Cluster: LAMININ RECEPTOR; n=4; Eukaryota|Rep: L... 132 1e-30
UniRef50_Q3LW95 Cluster: Ribosomal protein L10e; n=1; Bigelowiel... 93 1e-18
UniRef50_UPI0000499E88 Cluster: 60S ribosomal protein L10; n=1; ... 81 6e-15
UniRef50_UPI00005A4DCA Cluster: PREDICTED: similar to ribosomal ... 69 2e-11
UniRef50_Q01C83 Cluster: RL10_CAEEL 60S ribosomal protein L10; n... 60 1e-08
UniRef50_Q6LXR0 Cluster: 50S ribosomal protein L10e; n=3; Methan... 58 3e-08
UniRef50_P60617 Cluster: 50S ribosomal protein L10e; n=9; Euryar... 58 3e-08
UniRef50_Q8ZSV4 Cluster: 50S ribosomal protein L10e; n=9; Thermo... 57 7e-08
UniRef50_Q9UWP5 Cluster: 50S ribosomal protein L10e; n=4; Thermo... 55 4e-07
UniRef50_Q2FLD3 Cluster: Ribosomal protein L10.e; n=3; Methanomi... 51 6e-06
UniRef50_A7I691 Cluster: Ribosomal protein L10E; n=5; Archaea|Re... 50 1e-05
UniRef50_Q96YA4 Cluster: 50S ribosomal protein L10e; n=4; Sulfol... 48 4e-05
UniRef50_P58299 Cluster: 50S ribosomal protein L10e; n=9; Archae... 48 5e-05
UniRef50_UPI00015BAE8F Cluster: LSU ribosomal protein L10AE; n=1... 41 0.005
UniRef50_O27191 Cluster: 50S ribosomal protein L10e; n=6; Euryar... 37 0.077
UniRef50_A6GP53 Cluster: DNA repair protein RecO; n=1; Limnobact... 32 2.2
UniRef50_Q1YM22 Cluster: Sensor protein; n=4; Rhizobiales|Rep: S... 32 2.9
UniRef50_A4A044 Cluster: Methionine aminopeptidase; n=3; Plancto... 31 3.8
UniRef50_Q74AA6 Cluster: DNA-binding response regulator KdpE; n=... 31 6.7
UniRef50_Q9MAI3 Cluster: F12M16.8; n=2; Arabidopsis thaliana|Rep... 31 6.7
UniRef50_Q0DBX0 Cluster: Os06g0518100 protein; n=1; Oryza sativa... 31 6.7
UniRef50_A4HF83 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q6FV52 Cluster: Protein OS-9 homolog precursor; n=1; Ca... 31 6.7
UniRef50_UPI00015BCB22 Cluster: UPI00015BCB22 related cluster; n... 30 8.8
UniRef50_Q2T578 Cluster: Transcriptional regulator, LysR family;... 30 8.8
UniRef50_A1U868 Cluster: Transcriptional regulator, LysR family;... 30 8.8
>UniRef50_UPI00015B4E4A Cluster: PREDICTED: similar to ribosomal
protein L10e isoform 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ribosomal protein L10e isoform 2 -
Nasonia vitripennis
Length = 194
Score = 161 bits (391), Expect = 3e-39
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKK+A+V+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKKASVEDFPLCVHLVSDEYEQL 60
Query: 209 SSEALEAGRICCNK 250
SSEALEAGRIC NK
Sbjct: 61 SSEALEAGRICANK 74
>UniRef50_P27635 Cluster: 60S ribosomal protein L10; n=53;
Fungi/Metazoa group|Rep: 60S ribosomal protein L10 -
Homo sapiens (Human)
Length = 214
Score = 157 bits (381), Expect = 5e-38
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRYCKNKPYPKSRFCRGVPD KIRIFDLG+K+A VD+FPLC H+VSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQL 60
Query: 209 SSEALEAGRICCNKYLVK 262
SSEALEA RIC NKY+VK
Sbjct: 61 SSEALEAARICANKYMVK 78
>UniRef50_Q5B047 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 250
Score = 153 bits (371), Expect = 7e-37
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RRPARCYRYCKNKPYPKSRF RGVPDPKIRIFDLG+K+A VDDFPLCVHLVS+EYEQL
Sbjct: 1 MARRPARCYRYCKNKPYPKSRFNRGVPDPKIRIFDLGRKKANVDDFPLCVHLVSNEYEQL 60
Query: 209 SSEALEAGRICCNKYLV 259
SSEALEA RIC NKY++
Sbjct: 61 SSEALEAARICANKYVL 77
>UniRef50_Q96L21 Cluster: 60S ribosomal protein L10-like; n=168;
Eukaryota|Rep: 60S ribosomal protein L10-like - Homo
sapiens (Human)
Length = 214
Score = 152 bits (369), Expect = 1e-36
Identities = 67/78 (85%), Positives = 72/78 (92%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRYCKNKPYPKSRFCRGVPD KIRIFDLG+K+A VD+FPL H+VSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQL 60
Query: 209 SSEALEAGRICCNKYLVK 262
SSEALEA RIC NKY+VK
Sbjct: 61 SSEALEAARICANKYMVK 78
>UniRef50_Q9M5M7 Cluster: 60S ribosomal protein L10; n=52;
Eukaryota|Rep: 60S ribosomal protein L10 - Euphorbia
esula (Leafy spurge)
Length = 220
Score = 136 bits (330), Expect = 7e-32
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYR KNKPYPKSRFCRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 209 SSEALEAGRICCNKYLVK 262
SSEALEA RI CNKY+ K
Sbjct: 61 SSEALEAARIACNKYMTK 78
>UniRef50_Q6LAD9 Cluster: LAMININ RECEPTOR; n=4; Eukaryota|Rep:
LAMININ RECEPTOR - Arabidopsis thaliana (Mouse-ear
cress)
Length = 76
Score = 132 bits (319), Expect = 1e-30
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYR K KPYPKSR+CRGVPDPKIRI+D+G KR VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 209 SSEALEAGRICCNKYL 256
SSEALEA RI CNKY+
Sbjct: 61 SSEALEAARIACNKYM 76
>UniRef50_Q3LW95 Cluster: Ribosomal protein L10e; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10e - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 193
Score = 92.7 bits (220), Expect = 1e-18
Identities = 40/78 (51%), Positives = 57/78 (73%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRP +CYR+ KNKPYPKS++C+ P KI++FD+G KRA + +P C++LV+ + +
Sbjct: 1 MGRRPFKCYRFIKNKPYPKSKYCKKCPVSKIKMFDIGDKRAKKNIYPCCINLVNLQPINI 60
Query: 209 SSEALEAGRICCNKYLVK 262
SSE LE+ RI N+ L K
Sbjct: 61 SSECLESVRIVMNRNLTK 78
>UniRef50_UPI0000499E88 Cluster: 60S ribosomal protein L10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L10 - Entamoeba histolytica HM-1:IMSS
Length = 190
Score = 80.6 bits (190), Expect = 6e-15
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFP 169
MGRRP RCYR + PYPKS++CRGVPDP+I++FD+G + A DDFP
Sbjct: 1 MGRRPGRCYRLVRGHPYPKSKYCRGVPDPRIKLFDIGNRSAPCDDFP 47
>UniRef50_UPI00005A4DCA Cluster: PREDICTED: similar to ribosomal
protein L10; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L10 - Canis familiaris
Length = 171
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK 262
RG PD KI IF++G+K+A VD+FP C +VSD Y Q SEA EA IC +KY+VK
Sbjct: 7 RGAPDAKICIFEVGQKKAKVDEFPPCGQIVSDGYVQPFSEAPEAAHICSSKYMVK 61
>UniRef50_Q01C83 Cluster: RL10_CAEEL 60S ribosomal protein L10; n=1;
Ostreococcus tauri|Rep: RL10_CAEEL 60S ribosomal protein
L10 - Ostreococcus tauri
Length = 92
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATV 157
M RRPA+CYR KNKPYPKSR+CRGVP R G RA +
Sbjct: 1 MARRPAKCYRVIKNKPYPKSRYCRGVPGACERATTRGSGRARI 43
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 95 CRGVPDPKIRIFDLGKKRATVDDFPLCVHLV 187
C DPKIRI+D G K+ D FP CVHLV
Sbjct: 61 CDPFTDPKIRIYDAGMKKYNCDAFPACVHLV 91
>UniRef50_Q6LXR0 Cluster: 50S ribosomal protein L10e; n=3;
Methanococcus maripaludis|Rep: 50S ribosomal protein
L10e - Methanococcus maripaludis
Length = 173
Score = 58.4 bits (135), Expect = 3e-08
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RPARCYR + + Y + + R VP PK+ + +G A +FP+ V LVS +
Sbjct: 1 MALRPARCYRTIERRSYTRKEYVRAVPQPKVVHYVMGNPSA---EFPVQVQLVSKSDILI 57
Query: 209 SSEALEAGRICCNKYLV 259
ALE+ RI NKY++
Sbjct: 58 RHNALESSRIAGNKYIL 74
>UniRef50_P60617 Cluster: 50S ribosomal protein L10e; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L10e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 58.4 bits (135), Expect = 3e-08
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M +PA YR Y + + G+P KI +G+K+ DD+P+ + L+ +E QL
Sbjct: 1 MSDKPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQL 60
Query: 209 SSEALEAGRICCNKYLVK 262
+LEA R+ N++L+K
Sbjct: 61 RHGSLEASRLSANRHLIK 78
>UniRef50_Q8ZSV4 Cluster: 50S ribosomal protein L10e; n=9;
Thermoprotei|Rep: 50S ribosomal protein L10e -
Pyrobaculum aerophilum
Length = 180
Score = 57.2 bits (132), Expect = 7e-08
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 38 RPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATV-DDFPLCVHLVSDEYEQLSS 214
RPARCY+ K PY + + G P +I FD+G A F + LV +E Q+
Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRM 63
Query: 215 EALEAGRICCNKYLVK 262
+ALEA R +KYL K
Sbjct: 64 QALEAARQMASKYLTK 79
>UniRef50_Q9UWP5 Cluster: 50S ribosomal protein L10e; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L10e -
Pyrococcus furiosus
Length = 181
Score = 54.8 bits (126), Expect = 4e-07
Identities = 32/78 (41%), Positives = 39/78 (50%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RPA+ RY Y + + RG P PKI IFD+G DF V L + E Q+
Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGN---PAGDFEFEVSLHTAEPVQI 57
Query: 209 SSEALEAGRICCNKYLVK 262
ALEA R N+YL K
Sbjct: 58 RQNALEAARQQVNRYLQK 75
>UniRef50_Q2FLD3 Cluster: Ribosomal protein L10.e; n=3;
Methanomicrobia|Rep: Ribosomal protein L10.e -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 170
Score = 50.8 bits (116), Expect = 6e-06
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M R+P YR K Y + + G+P K+ FD+G +FP+ V LV DE Q+
Sbjct: 1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMGN---LTSEFPMEVSLVVDESCQI 57
Query: 209 SSEALEAGRICCNKYLVK 262
ALEA R+ N+ L K
Sbjct: 58 RHSALEAARMSINRKLNK 75
>UniRef50_A7I691 Cluster: Ribosomal protein L10E; n=5; Archaea|Rep:
Ribosomal protein L10E - Methanoregula boonei (strain
6A8)
Length = 248
Score = 50.0 bits (114), Expect = 1e-05
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M R+P + YR K Y + + GVP KI F++G +FP + L+ +E Q+
Sbjct: 1 MVRKPGKMYRNLAKKAYTRREYMGGVPGNKIVQFEMGN---LSQEFPTEIDLIVEETCQI 57
Query: 209 SSEALEAGRICCNKYLVK 262
ALEA RI N+ L+K
Sbjct: 58 RHSALEAARISVNRKLLK 75
>UniRef50_Q96YA4 Cluster: 50S ribosomal protein L10e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L10e -
Sulfolobus tokodaii
Length = 176
Score = 48.0 bits (109), Expect = 4e-05
Identities = 29/76 (38%), Positives = 37/76 (48%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M RP RCYR+ Y + + GVP PKI F +G D+ L LV+ E Q+
Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGVPMPKITKFTMGNVNGNY-DYEL--RLVALEKGQI 57
Query: 209 SSEALEAGRICCNKYL 256
ALEA R+ K L
Sbjct: 58 RHNALEAARVLALKQL 73
>UniRef50_P58299 Cluster: 50S ribosomal protein L10e; n=9;
Archaea|Rep: 50S ribosomal protein L10e - Thermoplasma
volcanium
Length = 176
Score = 47.6 bits (108), Expect = 5e-05
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
M +PAR Y Y + F GVP PKI F G ++ DFP+ + L++ E Q+
Sbjct: 1 MVTKPARMYTRITGPAYTRKEFMGGVPYPKITTFVQGNQKR---DFPIEMQLIAMESCQV 57
Query: 209 SSEALEAGRICCNKYLVK 262
ALEA R+ N+ + +
Sbjct: 58 RHTALEAARVSVNRRMTE 75
>UniRef50_UPI00015BAE8F Cluster: LSU ribosomal protein L10AE; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10AE - Ignicoccus hospitalis KIN4/I
Length = 173
Score = 41.1 bits (92), Expect = 0.005
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 38 RPARCY--RYCKN---KPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 202
+PARC+ R+ K PY + + G+P PK+ + +G D + V LV+ E
Sbjct: 3 KPARCFTKRHAKGFSGPPYTRHEYIHGIPQPKVVKWVMGNPHVDAD---VEVRLVALERA 59
Query: 203 QLSSEALEAGRICCNKYL 256
Q+ ALEA R+ +K L
Sbjct: 60 QVRHNALEAARVMVHKNL 77
>UniRef50_O27191 Cluster: 50S ribosomal protein L10e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L10e -
Methanobacterium thermoautotrophicum
Length = 160
Score = 37.1 bits (82), Expect = 0.077
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 71 KPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNK 250
+ Y + + + +P KI +D+G A +FP+ + + Q++ ALEA RI N+
Sbjct: 3 RAYTRREYIKKIPGSKIVQYDMGNLSA---EFPISLSVAVKAPTQITHNALEAARIASNR 59
Query: 251 YL 256
Y+
Sbjct: 60 YM 61
>UniRef50_A6GP53 Cluster: DNA repair protein RecO; n=1; Limnobacter
sp. MED105|Rep: DNA repair protein RecO - Limnobacter
sp. MED105
Length = 244
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 245 CNRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQA 105
C +G LP A R H L A +V PLS+ F + +L QA
Sbjct: 30 CKEHGRLPVVAKGAKRPHSGLRAVLVSFQPLSVRFTGKSEVKTLMQA 76
>UniRef50_Q1YM22 Cluster: Sensor protein; n=4; Rhizobiales|Rep: Sensor
protein - Aurantimonas sp. SI85-9A1
Length = 1067
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 107 PDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 232
P P + + G+ +DD PL LV D E+L ALEAG
Sbjct: 936 PAPAVAPTETGRTVLVIDDEPLVRMLVVDVLEELGYTALEAG 977
>UniRef50_A4A044 Cluster: Methionine aminopeptidase; n=3;
Planctomycetaceae|Rep: Methionine aminopeptidase -
Blastopirellula marina DSM 3645
Length = 265
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 186 TKCTHSGKSSTVALFLPKSKIRIFGSGTPRQNRDLGYGLFLQYR*HLAGRR 34
T+C + +A P+ + I G + + GYG+ +Y H GRR
Sbjct: 128 TQCAFDAMHAAIAAITPECCVAIIGRAVVAEAKKHGYGVVEEYVGHALGRR 178
>UniRef50_Q74AA6 Cluster: DNA-binding response regulator KdpE; n=8;
Bacteria|Rep: DNA-binding response regulator KdpE -
Geobacter sulfurreducens
Length = 234
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 89 RFCRGVPDPKIRI----FDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYL 256
R R P+P RI DL ++R TVD V L EYE L A+ AG++ + +
Sbjct: 127 RSIRQAPEPICRIGGLEVDLPRRRVTVDGVE--VQLTPTEYELLRLLAVHAGKVLTHSQI 184
Query: 257 VK 262
++
Sbjct: 185 LR 186
>UniRef50_Q9MAI3 Cluster: F12M16.8; n=2; Arabidopsis thaliana|Rep:
F12M16.8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 457
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 14 FVENTMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGK 142
F EN RR +R RYC + PYP S P+ K+ D+GK
Sbjct: 119 FFENLFTRR-SRGLRYCHSDPYPSSSSTSTSPE-KMGDSDIGK 159
>UniRef50_Q0DBX0 Cluster: Os06g0518100 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0518100 protein -
Oryza sativa subsp. japonica (Rice)
Length = 170
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 257 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLS 150
R CC GL P P S+ R+ +L A S P+S
Sbjct: 86 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPVS 121
>UniRef50_A4HF83 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 5140
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 160 IHCRSLFAQVENTDLW-VRHTPTKPRFRIRF 71
I+ R+LFAQ E+ LW + TKPR R+ F
Sbjct: 1549 IYVRALFAQSEHWGLWSAQALRTKPRMRVTF 1579
>UniRef50_Q6FV52 Cluster: Protein OS-9 homolog precursor; n=1;
Candida glabrata|Rep: Protein OS-9 homolog precursor -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 696
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 53 YRYCKNKPYPKSRFCRGVPDPKIRI-FDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 229
YRYC + + +++ PDP ++ + LG+ +++ L+ D+Y SE +E+
Sbjct: 118 YRYCGSGDF--TQYHGVAPDPNDKLTYTLGRSSKQIENREF--QLLYDDYGYYISEIIES 173
Query: 230 GRIC 241
G IC
Sbjct: 174 GDIC 177
>UniRef50_UPI00015BCB22 Cluster: UPI00015BCB22 related cluster; n=2;
unknown|Rep: UPI00015BCB22 UniRef100 entry - unknown
Length = 416
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 HEGRFVENTM-GRRPARCYRYCKNKPYP-KSRFCRGVPDPKIRIFDLGKKRATVDDFPLC 175
+EGRF++N +R + Y+ N P R+ V P I+ KK + V + LC
Sbjct: 186 NEGRFLDNYFENKRMEKFYKGVVNTPKQWLIRYGYDVEIPMELIYY--KKYSIVSNISLC 243
Query: 176 VHLVSDEYEQLSSE 217
VHL +E SSE
Sbjct: 244 VHLGFEEGATFSSE 257
>UniRef50_Q2T578 Cluster: Transcriptional regulator, LysR family;
n=2; Burkholderiaceae|Rep: Transcriptional regulator,
LysR family - Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 /CIP 106301)
Length = 325
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 157 HCRSLFAQVENTDLWVRHTPTKPRFRIRFILTISITSRWSAP 32
HCR++ AQ++ V + PR +R L S + W AP
Sbjct: 89 HCRNMAAQLDEAHAAVSQLQSGPRGWLRVTLPYSFGTTWIAP 130
>UniRef50_A1U868 Cluster: Transcriptional regulator, LysR family;
n=4; Gammaproteobacteria|Rep: Transcriptional regulator,
LysR family - Marinobacter aquaeolei (strain ATCC 700491
/ DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 307
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 154 CRSLFAQVENTDLWVRHTPTKPRFRIR 74
CR L QV++ D +V+H PR ++R
Sbjct: 77 CRELLVQVDDADAYVQHMQENPRGKLR 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,850,986
Number of Sequences: 1657284
Number of extensions: 5159265
Number of successful extensions: 13220
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13213
length of database: 575,637,011
effective HSP length: 65
effective length of database: 467,913,551
effective search space used: 10294098122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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