Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P13
(263 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 144 6e-36
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 0.79
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 1.4
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 1.4
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 27 2.4
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 4.2
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 4.2
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 25 7.4
U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 25 7.4
Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical pr... 25 9.8
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 25 9.8
AF026204-7|AAB71247.1| 272|Caenorhabditis elegans Hypothetical ... 25 9.8
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 25 9.8
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 25 9.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 25 9.8
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 25 9.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 9.8
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 144 bits (350), Expect = 6e-36
Identities = 64/78 (82%), Positives = 68/78 (87%)
Frame = +2
Query: 29 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 209 SSEALEAGRICCNKYLVK 262
SSEALEA RIC NKY+VK
Sbjct: 61 SSEALEAARICANKYMVK 78
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 89 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 235
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 107 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 12
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 107 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 12
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 840 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 869
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 107 AHPDKTEI*DTVYSYNIDNISLVGAPLCSPQS 12
AH +K I D + NI+ ISLVG PL + Q+
Sbjct: 812 AHSNKLNIGDQII--NINGISLVGLPLSAAQT 841
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -2
Query: 154 CRSLFAQVENTDLWVRHT--PTKPRFRIRFILTISITSRWSAPHCVL--HKATL 5
C A + NTD + T P +PRFR ++T T + HC + H AT+
Sbjct: 234 CEQNSATLPNTDQQLSPTLSPNEPRFRN--LITSEPTPSFECKHCTIKFHDATM 285
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -1
Query: 236 YGLLPAPQNSA--ARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSY 63
Y L P PQ S +H + S LS +CPSR + P TV++Y
Sbjct: 233 YSLYPPPQPSQQFVHSHNFHQPKFDASSMLSTGYCPSRNVATFKVDKPY-----GTVFTY 287
Query: 62 NIDN 51
+ N
Sbjct: 288 DHQN 291
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 107 PDPKIRIFDLGKKRATVDDFPLCVHLV 187
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 107 PDPKIRIFDLGKKRATVDDFPLCVHLV 187
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 98 RGVPDPKIRIFDLGKKRATVDDF 166
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 41 PARCYRYCKNKPYPKSRFCRGVPDPKIRIF 130
PA CYR P P++ +GVP R+F
Sbjct: 166 PAVCYRTIYTLPPPENFAAQGVPSAFNRMF 195
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 99 GVCLTQRSVFSTWAK 143
G+C +R +F TWA+
Sbjct: 162 GICNKERKIFETWAR 176
>U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical
protein F27D9.8b protein.
Length = 515
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 146 RATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 244
+A DD LCV L ++ L+S+ +E I C
Sbjct: 446 QAVADDGKLCVQLSFNDDRSLNSDRIEVKDIEC 478
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 216 RRWKQAVSVATSTS 257
RRWK+ V +AT+TS
Sbjct: 504 RRWKKVVPIATNTS 517
>Z99942-8|CAC70091.2| 439|Caenorhabditis elegans Hypothetical
protein H13N06.3b protein.
Length = 439
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +2
Query: 152 TVDDFPLCVHLVSDEYEQLSSEALEAGRI 238
+++DF C++ + + + +++E LE G I
Sbjct: 15 SIEDFKECLYQMQEARKSVTNEILETGHI 43
>Z99942-2|CAB17072.1| 468|Caenorhabditis elegans Hypothetical
protein H13N06.3a protein.
Length = 468
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +2
Query: 152 TVDDFPLCVHLVSDEYEQLSSEALEAGRI 238
+++DF C++ + + + +++E LE G I
Sbjct: 44 SIEDFKECLYQMQEARKSVTNEILETGHI 72
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 32 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 118
GRRPA Y Y + +P VP P+
Sbjct: 287 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 315
>AF026204-7|AAB71247.1| 272|Caenorhabditis elegans Hypothetical
protein C30E1.2 protein.
Length = 272
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 144 RERQWMTSHYACT*CLMSTSS*VLRRWKQAVSVATST 254
+E QW+ S C++S + V R K +++ T+T
Sbjct: 104 QENQWIVSPLQTVECVLSEQNNVYRPLKSKLALMTAT 140
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 32 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 118
GRRPA Y Y + +P VP P+
Sbjct: 251 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 279
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 32 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 118
GRRPA Y Y + +P VP P+
Sbjct: 254 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 282
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 32 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 118
GRRPA Y Y + +P VP P+
Sbjct: 6875 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6903
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 32 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 118
GRRPA Y Y + +P VP P+
Sbjct: 6299 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6327
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 32 GRRPARCYRYCKNKPYPKSRFCRGVPDPK 118
GRRPA Y Y + +P VP P+
Sbjct: 6939 GRRPAEIYDYLRIQPKKPPPTVEYVPQPR 6967
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,405,394
Number of Sequences: 27780
Number of extensions: 121279
Number of successful extensions: 314
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -