Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P12
(377 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 141 4e-33
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 106 1e-22
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 104 6e-22
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 103 1e-21
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 91 5e-18
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 85 5e-16
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 82 4e-15
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 81 5e-15
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 4e-13
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 75 6e-13
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 74 8e-13
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 73 2e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 70 1e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 70 1e-11
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 68 7e-11
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 66 2e-10
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 55 4e-07
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 48 8e-05
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 1.8
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 2.3
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.3
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 31 5.4
UniRef50_Q1IPM0 Cluster: Putative uncharacterized protein precur... 31 7.1
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 141 bits (341), Expect = 4e-33
Identities = 69/121 (57%), Positives = 85/121 (70%)
Frame = +2
Query: 14 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 193
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 194 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 373
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 374 L 376
L
Sbjct: 121 L 121
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 106 bits (255), Expect = 1e-22
Identities = 54/112 (48%), Positives = 74/112 (66%)
Frame = +2
Query: 41 DRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARH 220
++K +RT KS D+ T++ FN +IL+RLFMS++NRPP+SLSRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 221 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEIL 376
M+ +EG I VVVG V++D+R+Y VP + V AL TE ARARI AGGE L
Sbjct: 68 MQ--GKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECL 117
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 104 bits (249), Expect = 6e-22
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +2
Query: 14 MGIDINHK-HDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 190
MGID K H R RT KS +V T+A FN+++L+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 191 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 370
P+S+SR+AR +K+ VVVGTV++D R++ PK TVAAL T ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 371 IL 376
+
Sbjct: 121 CI 122
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 103 bits (247), Expect = 1e-21
Identities = 48/83 (57%), Positives = 65/83 (78%)
Frame = +2
Query: 128 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 307
TNAKFN I+L+RLFMSR N+ +SL+R+ R M K REG AVVVG +++DVR++ +PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 308 TVAALHVTEKARARILAAGGEIL 376
+ AL VT +ARARI+ AGGEI+
Sbjct: 69 KICALRVTARARARIIKAGGEII 91
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 91.5 bits (217), Expect = 5e-18
Identities = 46/83 (55%), Positives = 63/83 (75%)
Frame = +2
Query: 128 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 307
T+ FN+++L+RL M R + P+SLS+L++HM+K R AVVVGTV+ND R+ VPK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 308 TVAALHVTEKARARILAAGGEIL 376
+V AL VTE AR RILA+GGE+L
Sbjct: 98 SVCALRVTETARKRILASGGEVL 120
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 84.6 bits (200), Expect = 5e-16
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +2
Query: 14 MGIDINHK-HDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 190
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 191 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 370
+S+SRLA M K RE IAVV TV+ND RL T+P+MT+ AL + AR+RI AGG
Sbjct: 61 VLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGR 118
Query: 371 IL 376
+
Sbjct: 119 CM 120
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 81.8 bits (193), Expect = 4e-15
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +2
Query: 128 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 307
T+++FN +LRRL +R R PIS+SRL + + + VVVGTV++D RL TVPK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 308 TVAALHVTEKARARILAAGGEIL 376
V AL TE AR RILAAGG+ L
Sbjct: 315 NVCALRFTETARKRILAAGGKTL 337
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 81.4 bits (192), Expect = 5e-15
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +2
Query: 8 VKMGIDI-NHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRIN 184
+ MGID+ N +K R + S++ T+ FN+II +RL M +
Sbjct: 55 INMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPKRF 114
Query: 185 RPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 364
RPP+SLS+L +HM + +AVVVG++++D RL++ M V AL TE AR RI+ AG
Sbjct: 115 RPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAG 172
Query: 365 GEIL 376
GE L
Sbjct: 173 GECL 176
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.9 bits (176), Expect = 4e-13
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +2
Query: 14 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 193
+G+DI H DRKVRR E KSQD+ TN+ FN+++L+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 194 ISLSRL 211
++LSR+
Sbjct: 170 LALSRM 175
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 74.5 bits (175), Expect = 6e-13
Identities = 49/121 (40%), Positives = 62/121 (51%)
Frame = +2
Query: 14 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 193
M ID++ H RK + + T +KF + IL RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 194 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 373
+S S+LA MKK E AV V TV+ D R Y VPKM V AL T+ A A I AGG+
Sbjct: 61 VSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKC 117
Query: 374 L 376
L
Sbjct: 118 L 118
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 74.1 bits (174), Expect = 8e-13
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Frame = +2
Query: 128 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKP------TREGLIAVVVGTVSNDVRL 289
T++ FN+++ +RL SR NR PISLSR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 290 YTVPKMTVAALHVTEKARARILAAGGEIL 376
+P M V AL ++ AR I+AAGGE L
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECL 128
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 72.5 bits (170), Expect = 2e-12
Identities = 42/83 (50%), Positives = 54/83 (65%)
Frame = +2
Query: 128 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 307
T++ FN +LRRL +R R PIS+SRL + + + VVVGTV++DVRL TVPK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 308 TVAALHVTEKARARILAAGGEIL 376
V TE AR RILAAGG+ L
Sbjct: 395 KV----FTETARKRILAAGGKTL 413
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 70.1 bits (164), Expect = 1e-11
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = +2
Query: 14 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 193
+G+ ++ K +K + T KS D+ T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 194 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 352
+ LSRL R M ++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 70.1 bits (164), Expect = 1e-11
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = +2
Query: 14 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 193
+G+ ++ K +K + T KS D+ T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 194 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 352
+ LSRL R M ++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 67.7 bits (158), Expect = 7e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 182 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 361
N+PP+SLSR+ MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 362 GGEIL 376
GG+ L
Sbjct: 153 GGKNL 157
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 66.1 bits (154), Expect = 2e-10
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +2
Query: 188 PPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGG 367
PP+ LSR+ R MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 368 EIL 376
+IL
Sbjct: 107 KIL 109
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 55.2 bits (127), Expect = 4e-07
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2
Query: 128 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 307
T+ FN+I+L+RL M R + P+SLS+L++HM+ +R AVV+GTV++ L +P
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 308 TVAALHVT 331
TV + VT
Sbjct: 98 TVTLVLVT 105
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2
Query: 275 NDVRLYTVPKMTVAALHVTEKARARILAAGGEIL 376
+D R+ VPK++V AL VTE AR RILA+GGE+L
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVL 158
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 47.6 bits (108), Expect = 8e-05
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +2
Query: 137 KFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVA 316
KF + ++RR SR +R ISLS+L + K T + ++ V + ND R+ PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 317 ALHVTEKARARILAAGGEI 373
AL+ + + +I+ GG+I
Sbjct: 125 ALNFSSSVKKKIIENGGQI 143
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 209 LARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 322
+ + MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 2.3
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +2
Query: 137 KFNQIILRRLFMSRINRPPI--SLSRLARHMKKPTRE------GLIAVVVGTVSNDVRLY 292
+F ++I L++S RP I S+ LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTAG--LGIV 1301
Query: 293 TVPKMTVAALH 325
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 233 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 355
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 221 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEIL 376
+ + +EG + VV G + +L K+ VAA+ ++ KA +++ AGGE+L
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVL 103
>UniRef50_Q1IPM0 Cluster: Putative uncharacterized protein
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Putative uncharacterized protein precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 571
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 76 GCVLET-IGKTVQILG*THECQVQPDHPTEIVYEPYQPTSDFFVPFG 213
G V+E G+ ++LG T + ++PD+ +++ E TSD VP G
Sbjct: 498 GAVVENGKGQLARVLGQTIDAHIKPDNIAKVMKEGVSFTSDLVVPAG 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,799,919
Number of Sequences: 1657284
Number of extensions: 6379081
Number of successful extensions: 14788
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 14510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14773
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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