Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P12
         (377 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   2.1  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   4.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   6.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    22   6.5  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    22   8.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    22   8.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   8.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   8.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 299 EQCKASHHWRLCQ 261
           +QCK  HH +LC+
Sbjct: 397 QQCKRKHHSKLCK 409


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 211 QTGQRNRRSVDTAHKQSP 158
           +T  R   S+DT+HK +P
Sbjct: 44  ETAHRMAESMDTSHKPNP 61


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 164  LFMSRINRPPISLSRLARHMKKPTRE 241
            +F  ++NR  I+   L   MKKP R+
Sbjct: 1065 VFTDQVNRHTITRLLLNEAMKKPDRQ 1090


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 307 DSSRTTRY*ESSCPHLGCWR 366
           D+SR TR+     P++G W+
Sbjct: 886 DTSRHTRWAHRVLPNIGSWQ 905


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -2

Query: 340 SFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQT 206
           +F S V   Y  F    + H  G     Y D+ L C + HV   T
Sbjct: 368 NFTSKVDLPYTTFNCGEQKHFPGL----YGDEDLGCMVFHVCALT 408


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -2

Query: 340 SFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQT 206
           +F S V   Y  F    + H  G     Y D+ L C + HV   T
Sbjct: 376 NFTSKVDLPYTTFNCGEQKHFPGL----YGDEDLGCMVFHVCALT 416


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 211 QTGQRNRRSVDTAH 170
           QTG  NR+S D  H
Sbjct: 80  QTGYSNRKSCDVCH 93


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 177 VSTDLRFLCPVWHAT*RSLHAR 242
           V + LR+  PVWH   ++   R
Sbjct: 804 VDSILRYAAPVWHEATKNQECR 825


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,760
Number of Sequences: 2352
Number of extensions: 6891
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)