Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P12
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical ... 133 3e-32
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 0.83
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 0.83
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 28 1.9
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 27 4.5
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 26 7.8
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 26 7.8
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 26 7.8
>AL021492-6|CAA16387.1| 188|Caenorhabditis elegans Hypothetical
protein Y45F10D.12 protein.
Length = 188
Score = 133 bits (322), Expect = 3e-32
Identities = 68/121 (56%), Positives = 83/121 (68%)
Frame = +2
Query: 14 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 193
MGIDINHKHDR RRT KS++ T KFN I+L+RL MSR NR P
Sbjct: 1 MGIDINHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQP 60
Query: 194 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 373
+SL++LAR ++K E V + TV++D RLYTVPK++VAALHVTE ARARILAAGGEI
Sbjct: 61 LSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEI 120
Query: 374 L 376
+
Sbjct: 121 I 121
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 0.83
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -3
Query: 327 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMWRAKRDKEI 193
T S +TV +G+ + TS ++ TT+A KPS FM+ + KEI
Sbjct: 615 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMYDT-QSKEI 658
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 0.83
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -3
Query: 327 TCSAATVILGTV*SLTSLETVPTTTAIKPSRVGFFMWRAKRDKEI 193
T S +TV +G+ + TS ++ TT+A KPS FM+ + KEI
Sbjct: 822 TSSGSTVTVGSTEASTSGSSLATTSAPKPSVTCLFMYDT-QSKEI 865
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 340 SFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLAC-RLLHVACQTGQRNRRSVDTA 173
S+L+N G+C NSV P +D S Q AC + V+C G R +A
Sbjct: 933 SYLANAFQGFCCTANSVCPDNADYLIDDQSQQPRACTQGTFVSCPNGYACRSLTSSA 989
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 127 HECQVQPDHPTEIVYE 174
HECQVQ D PT ++ E
Sbjct: 575 HECQVQNDEPTALLRE 590
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical
protein T01H3.2 protein.
Length = 980
Score = 26.6 bits (56), Expect = 5.9
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +3
Query: 138 SSTRSSYGDCL*AVSTD 188
SSTR+S+GDC+ ++S++
Sbjct: 569 SSTRNSFGDCMWSISSE 585
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
R09H10.5 protein.
Length = 1603
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 296 QCKASHHWRLCQRLQRSNPRV*A-SSCGVPNG 204
QC A+H LCQ + +N V A C PNG
Sbjct: 1560 QCDANHFGNLCQLRKCTNGGVSAYGLCDCPNG 1591
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 179 INRPPISLSRLARHMKKPTREGLIA-VVVGTVSNDVRLYT 295
I +PP+ L +L HM PT+ + V G N +LY+
Sbjct: 385 IVQPPLPLHQLQGHMSAPTKITAVPNVAAGFHQNQQQLYS 424
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 179 INRPPISLSRLARHMKKPTREGLIA-VVVGTVSNDVRLYT 295
I +PP+ L +L HM PT+ + V G N +LY+
Sbjct: 1764 IVQPPLPLHQLQGHMSAPTKITAVPNVAAGFHQNQQQLYS 1803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,479,667
Number of Sequences: 27780
Number of extensions: 157848
Number of successful extensions: 405
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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