Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P06
(238 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 107 5e-23
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 107 5e-23
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 95 2e-19
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 94 5e-19
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 83 9e-16
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 81 5e-15
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 80 8e-15
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 71 5e-12
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 69 2e-11
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 56 2e-07
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 54 6e-07
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 50 1e-05
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 46 1e-04
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 44 5e-04
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 41 0.006
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 41 0.006
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 39 0.019
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 36 0.17
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 35 0.40
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 35 0.40
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 34 0.53
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 34 0.53
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 34 0.70
UniRef50_Q2GJW1 Cluster: Phage uncharacterized protein; n=1; Ana... 33 1.2
UniRef50_UPI0000585237 Cluster: PREDICTED: similar to cardioacce... 32 2.8
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 32 2.8
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 31 5.0
UniRef50_Q2CBN7 Cluster: Na+/H+ antiporter, CPA1 family protein;... 31 6.6
UniRef50_UPI00006A1942 Cluster: Ral GEF with PH domain and SH3 b... 30 8.7
UniRef50_UPI0000ECA156 Cluster: Synaptonemal complex protein 1 (... 30 8.7
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 107 bits (257), Expect = 5e-23
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RG KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 233 D 235
D
Sbjct: 61 D 61
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 107 bits (257), Expect = 5e-23
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RG KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 233 D 235
D
Sbjct: 61 D 61
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 95.5 bits (227), Expect = 2e-19
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGISRD HKRRATGGKR +RKKRK+ELGRPAANTKLG R+H VR+RG K RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 233 DT 238
+T
Sbjct: 61 ET 62
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 94.3 bits (224), Expect = 5e-19
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRG 202
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RG
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRG 50
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 83.4 bits (197), Expect = 9e-16
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGISRD HKR ATG KR+ RKKR +E GR ANT++GP+RIHLVR+RG K+R LRL
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60
Query: 233 DT 238
++
Sbjct: 61 ES 62
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 81.0 bits (191), Expect = 5e-15
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGISRD HKRR TGG+ +KKRKYELGRP++NTKLG + + VR RG K+RALRL
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60
Query: 233 DT 238
D+
Sbjct: 61 DS 62
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 80.2 bits (189), Expect = 8e-15
Identities = 42/63 (66%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGVFXKYRALR 229
MGISRD HKRRATGGK+ RKKRKYELGR ANTKL + + VR RG K+RALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 230 LDT 238
LDT
Sbjct: 61 LDT 63
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 70.9 bits (166), Expect = 5e-12
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGI+RD HKRRATGGK+ ++KK+K +GR ANT+LG R+H VR R K RALRL
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60
Query: 233 D 235
+
Sbjct: 61 E 61
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 68.9 bits (161), Expect = 2e-11
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGI R HKR+ TGGK RK+ K ELGR ANT+LG +R+ VR+RG K RALRL
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60
Query: 233 DT 238
DT
Sbjct: 61 DT 62
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGI+ HKRR TG K RKKR G ++TK+G +++ VR RG KY+ALRL
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60
Query: 233 D 235
D
Sbjct: 61 D 61
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 54.0 bits (124), Expect = 6e-07
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRL 232
MGI+R+ HKR++TGG ++ RKKR + GR +NTK+G + + +R RG K RAL L
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Frame = +2
Query: 53 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKL---------GPQRIHLVRSRGV 205
MGI+ D +KR TG + KKRKY LGR ANTKL Q+I +R RG
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60
Query: 206 FXKYRALRL 232
K RALRL
Sbjct: 61 NIKRRALRL 69
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 83 RRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRLD 235
R+ +GGK P KR+YELGR T+LG + + +RS G K+ LR D
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCD 60
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 44.4 bits (100), Expect = 5e-04
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 GKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGVFXKYRALRLDT 238
G P+++++ YELGR ANTKL + + VR RG K+RALR DT
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDT 160
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 83 RRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRLD 235
R+ +GG+ + K++ E+GR A T +G +R +VR+ G K RALRL+
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLE 59
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 40.7 bits (91), Expect = 0.006
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 74 WHKR---RATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGV 205
WH R + TGG+ P RKKRK+E+G P T +G +R L RG+
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEER-KLKERRGM 49
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 39.1 bits (87), Expect = 0.019
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 83 RRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGVFXKYRALRLD 235
R+ATGG+ R KRK+ELGR +G Q++ ++ G K R L+ D
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSD 59
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 83 RRATGGKRAPIRKKRKYELGRPAANTKLG 169
++ATGG RKKR++ELGR TKLG
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLG 38
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 34.7 bits (76), Expect = 0.40
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 89 ATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSR 199
A G +RAP K YE R AA T+L P + +R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 34.7 bits (76), Expect = 0.40
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 80 KRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGVFXKYRALRL 232
K++ TGGK+ I KK+ + G NT L I + R RG K++A+ L
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISL 54
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 34.3 bits (75), Expect = 0.53
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 83 RRATGGKRAPIRKKRKYELGRPAANTKLGPQ-RIHLVRSRGVFXKYR 220
++ +GG+ RKKRK ELGR +NT++ Q + ++R+ G K R
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVR 56
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 34.3 bits (75), Expect = 0.53
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 80 KRRATGGKRAPIRKKRKYELGRPAANTKLGPQ-RIHLVRSRGVFXKYR 220
+R +TG K KK K E+GRPAA T++ + + +VR RG K +
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVK 56
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 83 RRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHL 187
R+ TGG + R KRKYE+G P T L + I +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRI 44
>UniRef50_Q2GJW1 Cluster: Phage uncharacterized protein; n=1;
Anaplasma phagocytophilum HZ|Rep: Phage uncharacterized
protein - Anaplasma phagocytophilum (strain HZ)
Length = 445
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 237 VSRRRARYLXNTPRDLTKWMRWGPSLVLAAGRPNSYFLFLRMGARLPPVAL---LLCQ*S 67
V R +A Y R L W P ++L R + Y L M +LP +A C+ S
Sbjct: 314 VYRAKANYTELKKRVLHLSEHWKPDVILIEERSSGYQLLQEMSKKLPVIAFNPKKYCKLS 373
Query: 66 RLIPILAGSEK 34
RL+ I+ +K
Sbjct: 374 RLLQIIPTIQK 384
>UniRef50_UPI0000585237 Cluster: PREDICTED: similar to
cardioacceleratory peptide receptor; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
cardioacceleratory peptide receptor - Strongylocentrotus
purpuratus
Length = 416
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 47 AKMGISRDHWHKRRATGGKRAP-IRKKRKYELGRPAANTKL 166
A + IS+ W K T GKR+ KK K EL R A++T L
Sbjct: 225 AYLRISKKIWDKAHETSGKRSKRASKKNKIELNRNASSTTL 265
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 86 RATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRG 202
+ TGG+R P+R +RKYE+ R G Q + RG
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRG 50
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 31.1 bits (67), Expect = 5.0
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 53 MGISRDHWH-KRRATGGKRAPIRK-KRKYELGRPAANTKLG---PQRIHLVRSRGVFXKY 217
MGI + W K++ +GGKR K KRKY GRP T L + VR+RG K
Sbjct: 1 MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58
Query: 218 RALRL 232
+A ++
Sbjct: 59 KAKKV 63
>UniRef50_Q2CBN7 Cluster: Na+/H+ antiporter, CPA1 family protein;
n=4; Rhodobacteraceae|Rep: Na+/H+ antiporter, CPA1
family protein - Oceanicola granulosus HTCC2516
Length = 418
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 195 DLTKWMRWGPSL-VLAAGRPNSYFLFLRMGARLPPVAL 85
DLT W RWGP+ +LA P + F +G L + L
Sbjct: 92 DLTPWRRWGPTARLLAIAMPLTIFAVAALGVWLAGLTL 129
>UniRef50_UPI00006A1942 Cluster: Ral GEF with PH domain and SH3
binding motif 1; n=3; Tetrapoda|Rep: Ral GEF with PH
domain and SH3 binding motif 1 - Xenopus tropicalis
Length = 352
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 51 RWVSVVIIGIRGGLRAANVRPFVRRGSMS*VARLP 155
RW+ + II +RG A+N+RP + G +S V +P
Sbjct: 214 RWMHLAIITLRGQFLASNLRPKLLVGLLSDVLMVP 248
>UniRef50_UPI0000ECA156 Cluster: Synaptonemal complex protein 1
(SCP-1).; n=1; Gallus gallus|Rep: Synaptonemal complex
protein 1 (SCP-1). - Gallus gallus
Length = 972
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 127 PLLTNGRTFAARSPPLMPMITTDTHL--GWVRKEKIYL 20
PL+ NG+T+ ++PP+ M + T L G +K+K+ L
Sbjct: 844 PLVLNGKTYTVKTPPVHKMQSESTGLISGQRKKQKVLL 881
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,733,131
Number of Sequences: 1657284
Number of extensions: 4913150
Number of successful extensions: 11418
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11414
length of database: 575,637,011
effective HSP length: 57
effective length of database: 481,171,823
effective search space used: 10104608283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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