Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_P06
(238 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 22 0.78
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 3.1
AM269505-4|CAK30051.1| 23|Tribolium castaneum mlpt peptide 4 p... 20 4.2
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 19 7.3
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 19 7.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 19 9.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 19 9.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 19 9.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 19 9.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 19 9.6
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 19 9.6
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 19 9.6
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 22.2 bits (45), Expect = 0.78
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +2
Query: 110 PIRKKRKYELGRPAANTKLGPQRIH 184
P+R ++ PA N GP H
Sbjct: 36 PLRTSYQHHFNSPAGNAHTGPTGTH 60
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.2 bits (40), Expect = 3.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 92 TGGKRAPIRKKRKYEL 139
+GG+R R+KRK L
Sbjct: 584 SGGRRRQTREKRKKSL 599
>AM269505-4|CAK30051.1| 23|Tribolium castaneum mlpt peptide 4
protein.
Length = 23
Score = 19.8 bits (39), Expect = 4.2
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = +2
Query: 74 WHKRRATGGK 103
WH+ R GG+
Sbjct: 2 WHRNRGDGGR 11
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 19.0 bits (37), Expect = 7.3
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +1
Query: 178 HPLSQIPWC 204
HP +IP+C
Sbjct: 382 HPQDEIPYC 390
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 19.0 bits (37), Expect = 7.3
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +2
Query: 53 MGISRDHWH 79
+GI+ HWH
Sbjct: 201 LGINLHHWH 209
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 216 IVPCVLI 236
IVPCVLI
Sbjct: 219 IVPCVLI 225
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 216 IVPCVLI 236
IVPCVLI
Sbjct: 219 IVPCVLI 225
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 216 IVPCVLI 236
IVPCVLI
Sbjct: 219 IVPCVLI 225
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 216 IVPCVLI 236
IVPCVLI
Sbjct: 219 IVPCVLI 225
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 18.6 bits (36), Expect = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 216 IVPCVLI 236
IVPCVLI
Sbjct: 219 IVPCVLI 225
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 18.6 bits (36), Expect = 9.6
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 65 RDHWHKRRATGGKRAPIRKKRKYEL 139
RD W++ K RKK + E+
Sbjct: 98 RDWWNELEEKYDKEGEYRKKYEAEI 122
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 18.6 bits (36), Expect = 9.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 112 GRTFAARSPP 83
G+TF R PP
Sbjct: 163 GKTFMCRCPP 172
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,110
Number of Sequences: 336
Number of extensions: 1104
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used: 3428128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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