Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P03
         (167 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   2.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   2.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   2.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    19   4.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    19   4.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    19   6.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    18   8.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    18   8.2  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 155 RANRLRARACINSMSCSLGMSRS*SKSTPRKVNFLNVRFFLR 30
           + NR   +AC       +GMS+S S+   R+ N+  +   L+
Sbjct: 52  KKNRTACKACRLRKCLLVGMSKSGSR-YGRRSNWFKIHCLLQ 92


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 167 RLSPRANRLRARACI 123
           ++SPR N ++  +CI
Sbjct: 344 KVSPRVNTIKHTSCI 358


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 167 RLSPRANRLRARACI 123
           ++SPR N ++  +CI
Sbjct: 344 KVSPRVNTIKHTSCI 358


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 78  IDSSEGKLPECTFFLKSFID 19
           +D+ E  +PE   F+K  +D
Sbjct: 360 MDNCEELIPEYLNFIKGVVD 379


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 140 RARACINSMSCSLGMSRS*SKST 72
           R  A INS SC +  S S   S+
Sbjct: 367 RYSALINSQSCPITSSGSTDSSS 389


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 83  SKSTPRKVNFLNVRFFLRVSSTSAMP 6
           S ST   VN+++  FF R   +   P
Sbjct: 209 SYSTLHFVNYIDDLFFFRFEKSKFEP 234


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 165 LEPAREPPASARM 127
           L+P R+ P+S R+
Sbjct: 60  LDPGRKSPSSPRI 72


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 29  LLRKNVHSGSLP 64
           L +KN+HS  +P
Sbjct: 309 LRKKNIHSCHIP 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,037
Number of Sequences: 336
Number of extensions: 390
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 35
effective length of database: 110,825
effective search space used:  2216500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)